RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 A630023A22RikJ3QP60 199 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Pax8Q00288 457 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 KrtdapQ3V2T4 102 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 ScxQ64124 207 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Spin2cQ6NVE3 257 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr988Q7TRA1 309 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr987Q7TRA2 309 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ppp1r1cQ8BKK4 108 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Lmo3Q8BZL8 145 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ube2sQ921J4 223 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ccdc107Q9DCC3 242 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr937Q9EQB4 311 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem200bD3Z0P8 284 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm5426J3QNM7 103 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gpx3P46412 226 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gng11P61953 73 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Uba52P62984 128 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 SelenopP70274 380 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Shc1P98083 579 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 MestQ07646 335 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fam105aQ3TVP5 353 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Znf488Q5HZG9 337 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Slc17a4Q5NCM1 492 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rbfox3Q8BIF2 374 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rpl24Q8BP67 157 aaKnown RBP7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mob1bQ8BPB0 216 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Vmn1r201Q8R262 300 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Med9Q8VCS6 142 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Il25Q8VHH8 169 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mob1aQ921Y0 216 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem42Q9CR22 157 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 V1ra8Q9EQ48 279 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 NpvfQ9ESQ8 188 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 SrpxQ9R0M3 464 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Kcnj16Q9Z307 419 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Igkv10-94A0A075B5L1 115 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ighv6-6A0A075B5T3 119 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1192-ps1A0A1L1SRD7 309 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm13178B1AVU7 408 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mrap2D3Z1Q2 207 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Wisp3D3Z5L9 354 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm21974F6W3F3 119 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fcn2O70497 314 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ly86O88188 162 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Prdx1P35700 199 aaKnown RBP7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Klf1P46099 358 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Nkx3-1P97436 237 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Q3UST5 385 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Cxcl17Q5UW37 119 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Slc35a1Q61420 336 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zfp248Q640N4 576 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tgfbr1Q64729 503 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Q8BGD0 127 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem125Q8CHQ6 216 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Acer1Q8R4X1 273 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr935Q8VG16 308 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Spns2Q91VM4 549 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr101Q920Z0 308 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 9130008F23RikQ9D2Z6 181 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Josd1Q9DBJ6 202 aa7.36□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Igkv5-45A0A0B4J1J1 115 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Spin2gA0A0N4SW15 236 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm11213A0A1B0GR83 88 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zfp442A2AQA0 667 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 9830107B12RikD3Z5D6 160 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zfp961E9Q4R5 444 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Lipo5F6QKH6 233 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm11009F7CWA7 138 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm21693J3QK27 380 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr906K7N5P3 311 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm3512L7N206 146 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Lmx1bO88609 395 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tgfb1P04202 390 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 MdkP12025 140 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 BtcQ05928 177 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem213Q08EA8 116 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Krtcap2Q5RL79 136 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Slc17a2Q5SZA1 478 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1131Q7TR45 309 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr591Q7TRR7 314 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zpld1Q8BGZ8 415 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Baiap2Q8BKX1 535 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mchr1Q8JZL2 353 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ndufb2Q9CPU2 105 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Chrnb2Q9ERK7 501 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 F8Q06194 2319 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Numa1E9Q7G0 2094 aaKnown RBP7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 AF366264G3X9P9 502 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 GfyJ3KML8 504 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm26727M0QWT1 121 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tk1P04184 233 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 BC030870Q3V2G4 71 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Cd55Q61475 390 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1394Q8VET2 312 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Snrnp25Q8VIK1 123 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mpped1Q91ZG2 326 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 NtmQ99PJ0 344 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem126bQ9D1R1 230 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Wdr31Q9JHB4 367 aa7.35□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Dmxl1Q6PNC0 3013 aa7.35□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms