RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gng4P50153 75 aa14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Rps4xP62702 263 aaKnown RBP14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Rpl31P62900 125 aaKnown RBP14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Klk8Q61955 260 aa14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm17430F6RSK3 157 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Klhdc2Q4G5Y1 406 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm20816Q5FWD4 227 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Slc16a4Q8R0M8 500 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Coa3Q9D2R6 108 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 OtpO09113 325 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tcf21O35437 179 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Rps11P62281 158 aaKnown RBP14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 A3galt2Q3V1N9 370 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Chrdl2Q8VEA6 426 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fam166aQ9D4K5 319 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ppp1r1aQ9ERT9 171 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Fam222bQ6P539 562 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 SinhcafQ8C8M1 221 aaKnown RBP14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Trbv29A0A0G2LB96 114 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Epha8O09127 1004 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr123Q8VFQ1 309 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Eaf1Q9D4C5 268 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r46Q9EQ45 309 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 SonQ9QX47 2444 aaKnown RBP14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Nup37Q9CWU9 326 aa14.45□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Cited2O35740 269 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Bex6Q3TZW7 114 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Dtx1Q61010 627 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Coq2Q66JT7 374 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr178E9Q9T3 319 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 AhsgP29699 345 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Rpl8P62918 257 aaKnown RBP14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 OsmP53347 263 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Vstm2lQ6PDS0 220 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Zfp954Q7TNU5 416 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr490Q8VFD2 314 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Dido1Q8C9B9 2256 aaKnown RBP14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Scgb1b19F6WYW0 93 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ins2P01326 110 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Lilra6A0A0B4J1F3 663 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Slc25a45Q8CFJ7 288 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Lhx9Q9WUH2 397 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Srp14P16254 110 aaKnown RBP14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 RprmlQ3URD2 117 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Samd10Q7TST3 202 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tmem106bQ80X71 275 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Habp2Q8K0D2 558 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ighv7-1A0A075B5S2 121 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm21732J3QM79 361 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm21921J3QNB5 361 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Chchd1Q9CQA6 118 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ceacam11Q9D0Z8 303 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 CadB2RQC6 2225 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Q9D4G1 230 aa14.44□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 P01795 144 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 C1qtnf4Q8R066 326 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 ClpsQ9CQC2 113 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Smim13E9Q942 88 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tmem140Q8BGY5 185 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 MmdQ9CQY7 238 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 P01806 116 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Bsph2Q0Q236 131 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 G0s2Q61585 103 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Lax1Q8BHB3 407 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tmprss11fQ8BHM9 439 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tnfrsf19Q9JLL3 416 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Adamts9E9PUN6 1931 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Arhgap21Q6DFV3 1944 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Olfr513Q8VFZ3 309 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Egr4Q9WUF2 478 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm20403G3UYB0 123 aa14.43□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ighv14-2A0A075B5R7 117 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Smim9Q3V0X1 137 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ltbp3Q61810 1268 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 B430218F22RikQ8BQR5 223 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Kcne3Q9WTW2 103 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm2026A2ART4 498 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 H2-Ab1P01921 265 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Zdhhc23Q5Y5T3 425 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Defa22Q8C1N8 93 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 LbhQ9CX60 105 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Spsb2O88838 264 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gltpd2Q8K0R6 321 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 RetnQ99P87 114 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ybx2Q9Z2C8 360 aaKnown RBP14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ighv14-3A0A075B5R9 117 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Prss12O08762 761 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Tmem40Q4FJU9 225 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Znf641Q8BZ34 422 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 PaxxQ8K0Y7 205 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gpr132Q9Z282 382 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ccr6O54689 367 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Leprotl1Q9CQ74 131 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Ndufa2Q9CQ75 99 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Gm45623A0A1B0GSF6 103 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Cdx2P43241 311 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 C1qaP98086 245 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Mob3bQ8VE04 216 aa14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Suclg1Q9WUM5 346 aaKnown RBP14.42□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Zfp114B2RRA8 586 aa14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms