RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 P01644 108 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 P01645 108 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 P01646 108 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 P01647 108 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Smim6Q3U0I6 56 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Znf629Q6A085 867 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Mtch2Q791V5 303 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmprss11fQ8BHM9 439 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ppp1r1aQ9ERT9 171 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gpa33Q9JKA5 319 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Igkv12-46A0A140T8P6 115 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 AponG3X9D6 251 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rps20P60867 119 aaKnown RBP12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Hoxc4Q08624 264 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ifna11Q61716 190 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmem101Q91VP7 257 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Scgb1b11A0A087WQJ0 93 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm45785A0A1B0GT05 94 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Bet1lO35153 111 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Csn3P06796 181 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Khdc1cQ4KL78 166 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tctn1Q8BZ64 593 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmem144Q8VEH0 348 aa12.19□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Lsm6P62313 80 aaKnown RBP12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 MyocosQ3UWS6 143 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr498Q8VEW2 330 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Klf5Q9Z0Z7 446 aaKnown RBP12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Hide1Q75VT8 222 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rbpms2Q8VC52 206 aaKnown RBP12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr279Q8VFD8 310 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tcf23Q9JLR5 209 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21310J3QQ23 232 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Vamp8O70404 101 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Lrfn4Q80XU8 636 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr1367Q8VFG2 316 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rasl11bQ922H7 247 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ca15Q99N23 324 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Chchd1Q9CQA6 118 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Q9DAL9 119 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Lilra6A0A0B4J1F3 663 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr235E9Q9Z6 312 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm9733Q1AN91 178 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gpr135Q7TQP2 457 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr874Q7TRE6 310 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Dppa1Q810Y7 116 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Casp8ap2Q9WUF3 1962 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Vmn1r78K7N608 313 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ssty1P13675 232 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Bex6Q3TZW7 114 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ifi27Q8C6G0 260 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gpr84Q8CIM5 396 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 PaxxQ8K0Y7 205 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tlnrd1Q9ERE8 362 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm28845A0A087WR76 214 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 V1rd19Q3KNP5 305 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr94Q6UAH0 386 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Vmn1r233Q8R294 319 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 BmfQ91ZE9 185 aa12.18□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ighg2cF6TQW2 404 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 P01864 335 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Sumo2P61957 95 aaKnown RBP12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Spink11Q09TK7 88 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr322Q5NCC8 327 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Srsf4Q8VE97 489 aaKnown RBP12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 AicdaQ9WVE0 198 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Klhdc2Q4G5Y1 406 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Dtx4Q6PDK8 616 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr593Q8VF28 327 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 MrgprgQ91ZB5 289 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmprss5Q9ER04 455 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm16442D3YZG3 307 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 TymsP07607 307 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Bglap3P54615 95 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 C1sbQ8CFG8 688 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 GferP56213 198 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Cks1bP61025 79 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 SriQ6P069 198 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 TecrlQ8BFZ1 361 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Dph3Q8K0W9 82 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmem179bQ9CY24 219 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 DptQ9QZZ6 201 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Vsig10l2A0A140LHF2 776 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Dennd4aE9Q8V6 1869 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21913J3KML9 361 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21732J3QM79 361 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21921J3QNB5 361 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21776J3QPJ5 361 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr1324Q8VEU7 332 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr493Q8VEW5 314 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ighv1-43A0A0A6YXN5 117 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Mesp2O08574 370 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 FmodP50608 376 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Klf16P58334 251 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr1380Q7TQT5 311 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Spink2Q8BMY7 86 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm14409A2ARR8 349 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Pdlim4P70271 330 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Vkorc1Q9CRC0 161 aa12.17□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ralgapa2A3KGS3 1872 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Nlgn4lB0F2B4 945 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms