RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YHL017WP38745 532 aa4.34□□□□□ -1.71
YSF3YNL138W-A TEL2P53038 688 aa4.34□□□□□ -1.71
YSF3YNL138W-A DIA2Q08496 732 aaPredicted RBP4.34□□□□□ -1.71
YSF3YNL138W-A MCH5Q08777 521 aa4.34□□□□□ -1.71
YSF3YNL138W-A HFI1Q12060 488 aa4.34□□□□□ -1.71
YSF3YNL138W-A YKL033W-AQ86ZR7 236 aa4.34□□□□□ -1.71
YSF3YNL138W-A IKI3Q06706 1349 aaKnown RBP4.33□□□□□ -1.72
YSF3YNL138W-A EUG1P32474 517 aa4.33□□□□□ -1.72
YSF3YNL138W-A PET127P32606 800 aa4.33□□□□□ -1.72
YSF3YNL138W-A DID4P36108 232 aa4.33□□□□□ -1.72
YSF3YNL138W-A ESL2P36168 1195 aa4.33□□□□□ -1.72
YSF3YNL138W-A APE3P37302 537 aaKnown RBP4.33□□□□□ -1.72
YSF3YNL138W-A CBR1P38626 284 aaKnown RBP4.33□□□□□ -1.72
YSF3YNL138W-A NOP15P53927 220 aaPredicted RBP4.33□□□□□ -1.72
YSF3YNL138W-A TMN2Q04562 672 aa4.33□□□□□ -1.72
YSF3YNL138W-A THI22Q06490 572 aa4.33□□□□□ -1.72
YSF3YNL138W-A MLH3Q12083 715 aa4.33□□□□□ -1.72
YSF3YNL138W-A ZRT2Q12436 422 aa4.33□□□□□ -1.72
YSF3YNL138W-A TMA17Q12513 150 aa4.33□□□□□ -1.72
YSF3YNL138W-A RPS17AP02407 136 aaKnown RBP4.32□□□□□ -1.72
YSF3YNL138W-A GLN4P13188 809 aaKnown RBP4.32□□□□□ -1.72
YSF3YNL138W-A RPS17BP14127 136 aaKnown RBP4.32□□□□□ -1.72
YSF3YNL138W-A IME1P21190 360 aa4.32□□□□□ -1.72
YSF3YNL138W-A BCS1P32839 456 aa4.32□□□□□ -1.72
YSF3YNL138W-A YPT7P32939 208 aa4.32□□□□□ -1.72
YSF3YNL138W-A PHO11P35842 467 aa4.32□□□□□ -1.72
YSF3YNL138W-A PHO12P38693 467 aa4.32□□□□□ -1.72
YSF3YNL138W-A YJR120WP47157 116 aa4.32□□□□□ -1.72
YSF3YNL138W-A VPS4P52917 437 aa4.32□□□□□ -1.72
YSF3YNL138W-A YGR117CP53270 476 aa4.32□□□□□ -1.72
YSF3YNL138W-A FHN1P53279 174 aa4.32□□□□□ -1.72
YSF3YNL138W-A GND2P53319 492 aa4.32□□□□□ -1.72
YSF3YNL138W-A PTA1Q01329 785 aaPredicted RBP4.32□□□□□ -1.72
YSF3YNL138W-A TIM44Q01852 431 aa4.32□□□□□ -1.72
YSF3YNL138W-A TRM44Q02648 567 aaKnown RBP4.32□□□□□ -1.72
YSF3YNL138W-A IRC3Q06683 689 aa4.32□□□□□ -1.72
YSF3YNL138W-A STP4Q07351 490 aa4.32□□□□□ -1.72
YSF3YNL138W-A GRX6Q12438 231 aa4.32□□□□□ -1.72
YSF3YNL138W-A POM34Q12445 299 aa4.32□□□□□ -1.72
YSF3YNL138W-A TOR2P32600 2474 aaKnown RBP4.32□□□□□ -1.72
YSF3YNL138W-A ERG20P08524 352 aaKnown RBP4.31□□□□□ -1.72
YSF3YNL138W-A LPD1P09624 499 aaKnown RBP4.31□□□□□ -1.72
YSF3YNL138W-A BIT2P38346 545 aa4.31□□□□□ -1.72
YSF3YNL138W-A YIL077CP40508 320 aa4.31□□□□□ -1.72
YSF3YNL138W-A BUD27P43573 796 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
YSF3YNL138W-A BIT61P47041 543 aa4.31□□□□□ -1.72
YSF3YNL138W-A UBA2P52488 636 aa4.31□□□□□ -1.72
YSF3YNL138W-A SSL2Q00578 843 aa4.31□□□□□ -1.72
YSF3YNL138W-A HBT1Q07653 1046 aaKnown RBP4.31□□□□□ -1.72
YSF3YNL138W-A HPR1P17629 752 aaKnown RBP4.3□□□□□ -1.72
YSF3YNL138W-A FEN2P25621 512 aaKnown RBP4.3□□□□□ -1.72
YSF3YNL138W-A PAH1P32567 862 aa4.3□□□□□ -1.72
YSF3YNL138W-A SEC6P32844 805 aa4.3□□□□□ -1.72
YSF3YNL138W-A SER1P33330 395 aaKnown RBP4.3□□□□□ -1.72
YSF3YNL138W-A STV1P37296 890 aa4.3□□□□□ -1.72
YSF3YNL138W-A DUN1P39009 513 aa4.3□□□□□ -1.72
YSF3YNL138W-A PIG2P40187 538 aa4.3□□□□□ -1.72
YSF3YNL138W-A VID28P40547 921 aa4.3□□□□□ -1.72
YSF3YNL138W-A BUD8P41698 603 aa4.3□□□□□ -1.72
YSF3YNL138W-A RFX1P48743 811 aa4.3□□□□□ -1.72
YSF3YNL138W-A YAP1802P53309 568 aa4.3□□□□□ -1.72
YSF3YNL138W-A VBA4Q04602 768 aaKnown RBP4.3□□□□□ -1.72
YSF3YNL138W-A YDR034W-BQ6Q5X2 51 aa4.3□□□□□ -1.72
YSF3YNL138W-A APM4Q99186 491 aa4.3□□□□□ -1.72
YSF3YNL138W-A YML133CQ03099 1374 aa4.29□□□□□ -1.72
YSF3YNL138W-A THR1P17423 357 aaKnown RBP4.29□□□□□ -1.72
YSF3YNL138W-A MTH1P35198 433 aa4.29□□□□□ -1.72
YSF3YNL138W-A GPP2P40106 250 aaKnown RBP4.29□□□□□ -1.72
YSF3YNL138W-A SDS3P40505 327 aa4.29□□□□□ -1.72
YSF3YNL138W-A IES1P43579 692 aa4.29□□□□□ -1.72
YSF3YNL138W-A DUG1P43616 481 aaKnown RBP4.29□□□□□ -1.72
YSF3YNL138W-A SMX3P54999 86 aaPredicted RBP4.29□□□□□ -1.72
YSF3YNL138W-A CHS5Q12114 671 aaKnown RBP4.29□□□□□ -1.72
YSF3YNL138W-A USV1Q12132 391 aa4.29□□□□□ -1.72
YSF3YNL138W-A TEL1P38110 2787 aa4.28□□□□□ -1.72
YSF3YNL138W-A CDC26P14724 124 aa4.28□□□□□ -1.72
YSF3YNL138W-A SPE2P21182 396 aa4.28□□□□□ -1.72
YSF3YNL138W-A ATP12P22135 325 aa4.28□□□□□ -1.72
YSF3YNL138W-A SEC15P22224 910 aa4.28□□□□□ -1.72
YSF3YNL138W-A PRP28P23394 588 aa4.28□□□□□ -1.72
YSF3YNL138W-A KIN82P25341 720 aa4.28□□□□□ -1.72
YSF3YNL138W-A YBR071WP38243 211 aa4.28□□□□□ -1.72
YSF3YNL138W-A COS111P38308 924 aa4.28□□□□□ -1.72
YSF3YNL138W-A PXA1P41909 870 aa4.28□□□□□ -1.72
YSF3YNL138W-A YFT2Q06676 274 aa4.28□□□□□ -1.72
YSF3YNL138W-A TRE2Q08693 809 aa4.28□□□□□ -1.72
YSF3YNL138W-A RMP1Q12530 201 aa4.28□□□□□ -1.72
YSF3YNL138W-A LYS2P07702 1392 aa4.27□□□□□ -1.73
YSF3YNL138W-A FAB1P34756 2278 aa4.27□□□□□ -1.73
YSF3YNL138W-A SSB1P11484 613 aaKnown RBP4.27□□□□□ -1.73
YSF3YNL138W-A SET3P36124 751 aa4.27□□□□□ -1.73
YSF3YNL138W-A UBS1P38290 277 aa4.27□□□□□ -1.73
YSF3YNL138W-A SSB2P40150 613 aaKnown RBP4.27□□□□□ -1.73
YSF3YNL138W-A NDC80P40460 691 aa4.27□□□□□ -1.73
YSF3YNL138W-A NIT2P47016 307 aa4.27□□□□□ -1.73
YSF3YNL138W-A MPS3P47069 682 aa4.27□□□□□ -1.73
YSF3YNL138W-A RRT6P53117 311 aaPredicted RBP4.27□□□□□ -1.73
YSF3YNL138W-A SKY1Q03656 742 aa4.27□□□□□ -1.73
YSF3YNL138W-A RBA50Q04418 439 aa4.27□□□□□ -1.73
YSF3YNL138W-A YPR027CQ12079 277 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms