RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W DBP10Q12389 995 aaKnown RBP7.6□□□□□ -1.19
HDA1YNL021W POL3P15436 1097 aa7.59□□□□□ -1.19
HDA1YNL021W SIR1P21691 654 aa7.59□□□□□ -1.19
HDA1YNL021W ROX1P25042 368 aa7.59□□□□□ -1.19
HDA1YNL021W FRD1P32614 470 aaKnown RBP7.59□□□□□ -1.19
HDA1YNL021W RRF1P38771 230 aa7.59□□□□□ -1.19
HDA1YNL021W GIP2P40036 548 aa7.59□□□□□ -1.19
HDA1YNL021W MAM1P40065 302 aa7.59□□□□□ -1.19
HDA1YNL021W PSF2P40359 213 aa7.59□□□□□ -1.19
HDA1YNL021W BUD27P43573 796 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
HDA1YNL021W YNR071CP53757 342 aa7.59□□□□□ -1.19
HDA1YNL021W PCD1Q12524 340 aa7.59□□□□□ -1.19
HDA1YNL021W BET2P20133 325 aa7.58□□□□□ -1.2
HDA1YNL021W YKL100CP34248 587 aa7.58□□□□□ -1.2
HDA1YNL021W HFM1P51979 1187 aa7.58□□□□□ -1.2
HDA1YNL021W IWR1Q07532 353 aaPredicted RBP7.58□□□□□ -1.2
HDA1YNL021W XYL2Q07993 356 aa7.58□□□□□ -1.2
HDA1YNL021W YOR022CQ12204 715 aa7.58□□□□□ -1.2
HDA1YNL021W RPL19AP0CX82 189 aaKnown RBP7.58□□□□□ -1.2
HDA1YNL021W RPL19BP0CX83 189 aaPredicted RBP7.58□□□□□ -1.2
HDA1YNL021W HSP104P31539 908 aaKnown RBP7.58□□□□□ -1.2
HDA1YNL021W FMP10P40098 244 aa7.58□□□□□ -1.2
HDA1YNL021W SHR5P41912 237 aa7.58□□□□□ -1.2
HDA1YNL021W YFL052WP43551 465 aa7.58□□□□□ -1.2
HDA1YNL021W ZDS2P54786 942 aa7.58□□□□□ -1.2
HDA1YNL021W CIR2Q08822 631 aa7.58□□□□□ -1.2
HDA1YNL021W CPA2P03965 1118 aaKnown RBP7.57□□□□□ -1.2
HDA1YNL021W HSF1P10961 833 aa7.57□□□□□ -1.2
HDA1YNL021W RPT3P33298 428 aaKnown RBP7.57□□□□□ -1.2
HDA1YNL021W CEP3P40969 608 aa7.57□□□□□ -1.2
HDA1YNL021W YNL058CP53947 316 aa7.57□□□□□ -1.2
HDA1YNL021W RSF2P46974 1380 aa7.57□□□□□ -1.2
HDA1YNL021W ACE2P21192 770 aa7.57□□□□□ -1.2
HDA1YNL021W AMS1P22855 1083 aa7.57□□□□□ -1.2
HDA1YNL021W YSC84P32793 468 aa7.57□□□□□ -1.2
HDA1YNL021W PSP1P50896 841 aaKnown RBP7.57□□□□□ -1.2
HDA1YNL021W STP4Q07351 490 aa7.57□□□□□ -1.2
HDA1YNL021W ELG1Q12050 791 aa7.57□□□□□ -1.2
HDA1YNL021W ARG3P05150 338 aa7.56□□□□□ -1.2
HDA1YNL021W RPD3P32561 433 aa7.56□□□□□ -1.2
HDA1YNL021W YIL166CP40445 542 aa7.56□□□□□ -1.2
HDA1YNL021W BFA1P47113 574 aa7.56□□□□□ -1.2
HDA1YNL021W SAP4P53036 818 aa7.56□□□□□ -1.2
HDA1YNL021W HST3P53687 447 aa7.56□□□□□ -1.2
HDA1YNL021W YCG1Q06680 1035 aa7.56□□□□□ -1.2
HDA1YNL021W RPS17AP02407 136 aaKnown RBP7.55□□□□□ -1.2
HDA1YNL021W ADE3P07245 946 aaKnown RBP7.55□□□□□ -1.2
HDA1YNL021W RPS17BP14127 136 aaKnown RBP7.55□□□□□ -1.2
HDA1YNL021W CTF13P35203 478 aa7.55□□□□□ -1.2
HDA1YNL021W RRT14P40470 206 aa7.55□□□□□ -1.2
HDA1YNL021W TED1P40533 473 aa7.55□□□□□ -1.2
HDA1YNL021W ISA1Q07821 250 aaPredicted RBP7.55□□□□□ -1.2
HDA1YNL021W IME1P21190 360 aa7.55□□□□□ -1.2
HDA1YNL021W MDL2P33311 773 aa7.55□□□□□ -1.2
HDA1YNL021W SAE2P46946 345 aa7.55□□□□□ -1.2
HDA1YNL021W YKR011CQ02209 353 aa7.55□□□□□ -1.2
HDA1YNL021W TIM50Q02776 476 aa7.55□□□□□ -1.2
HDA1YNL021W HOT1Q03213 719 aa7.55□□□□□ -1.2
HDA1YNL021W RCR2Q03446 210 aaKnown RBP7.55□□□□□ -1.2
HDA1YNL021W YPR196WQ06595 470 aa7.55□□□□□ -1.2
HDA1YNL021W ADY3Q07732 790 aa7.55□□□□□ -1.2
HDA1YNL021W GPR1Q12361 961 aa7.55□□□□□ -1.2
HDA1YNL021W NOT3P06102 836 aaKnown RBP7.54□□□□□ -1.2
HDA1YNL021W DIT1P21623 536 aa7.54□□□□□ -1.2
HDA1YNL021W RFA1P22336 621 aaKnown RBP7.54□□□□□ -1.2
HDA1YNL021W IMG2P25642 146 aaPredicted RBP7.54□□□□□ -1.2
HDA1YNL021W EAR1Q03212 550 aa7.54□□□□□ -1.2
HDA1YNL021W RTN2Q12443 393 aa7.54□□□□□ -1.2
HDA1YNL021W ECM21P38167 1117 aaKnown RBP7.54□□□□□ -1.2
HDA1YNL021W MIP6P38760 659 aaKnown RBP7.54□□□□□ -1.2
HDA1YNL021W VPS75P53853 264 aa7.54□□□□□ -1.2
HDA1YNL021W YRF1-3P0CX14 1859 aa7.54□□□□□ -1.2
HDA1YNL021W YRF1-7P0CX15 1859 aa7.54□□□□□ -1.2
HDA1YNL021W YRF1-6P53819 1859 aa7.54□□□□□ -1.2
HDA1YNL021W EDE1P34216 1381 aa7.53□□□□□ -1.2
HDA1YNL021W PRC1P00729 532 aa7.53□□□□□ -1.2
HDA1YNL021W SUI3P09064 285 aaKnown RBP7.53□□□□□ -1.2
HDA1YNL021W SAP190P36123 1033 aa7.53□□□□□ -1.2
HDA1YNL021W NPR3P38742 1146 aa7.53□□□□□ -1.2
HDA1YNL021W OSH7P38755 437 aa7.53□□□□□ -1.2
HDA1YNL021W POP2P39008 433 aa7.53□□□□□ -1.2
HDA1YNL021W CIR1P42940 261 aa7.53□□□□□ -1.2
HDA1YNL021W DUO1P53168 247 aaKnown RBP7.53□□□□□ -1.2
HDA1YNL021W YMR074CQ04773 145 aa7.53□□□□□ -1.2
HDA1YNL021W CUE5Q08412 411 aaKnown RBP7.53□□□□□ -1.2
HDA1YNL021W NAR1P23503 491 aaKnown RBP7.52□□□□□ -1.2
HDA1YNL021W DGR2P32330 852 aa7.52□□□□□ -1.2
HDA1YNL021W YJL068CP40363 299 aa7.52□□□□□ -1.2
HDA1YNL021W SMF3Q12078 473 aaPredicted RBP7.52□□□□□ -1.2
HDA1YNL021W MIS1P09440 975 aaKnown RBP7.52□□□□□ -1.21
HDA1YNL021W PMS1P14242 873 aa7.52□□□□□ -1.21
HDA1YNL021W SAC6P32599 642 aaKnown RBP7.52□□□□□ -1.21
HDA1YNL021W YLF2P38746 405 aa7.52□□□□□ -1.21
HDA1YNL021W SPO22P40511 975 aa7.52□□□□□ -1.21
HDA1YNL021W PIL1P53252 339 aaKnown RBP7.52□□□□□ -1.21
HDA1YNL021W ACS1Q01574 713 aa7.52□□□□□ -1.21
HDA1YNL021W PFK2P16862 959 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
HDA1YNL021W DBF4P32325 704 aa7.51□□□□□ -1.21
HDA1YNL021W MTC7P32633 139 aa7.51□□□□□ -1.21
HDA1YNL021W NNK1P36003 928 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 116 ms