RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A YCG1Q06680 1035 aa2.56□□□□□ -2
HSK3YKL138C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
HSK3YKL138C-A CPA2P03965 1118 aaKnown RBP2.55□□□□□ -2
HSK3YKL138C-A RPL7AP05737 244 aaKnown RBP2.55□□□□□ -2
HSK3YKL138C-A HMG2P12684 1045 aa2.55□□□□□ -2
HSK3YKL138C-A ACO1P19414 778 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
HSK3YKL138C-A MRC1P25588 1096 aa2.55□□□□□ -2
HSK3YKL138C-A YPT10P38146 199 aa2.55□□□□□ -2
HSK3YKL138C-A YGR237CP50089 785 aa2.55□□□□□ -2
HSK3YKL138C-A DAK1P54838 584 aaKnown RBP2.55□□□□□ -2
HSK3YKL138C-A PPN1Q04119 674 aa2.55□□□□□ -2
HSK3YKL138C-A HLR1Q04429 423 aa2.55□□□□□ -2
HSK3YKL138C-A RPL7BQ12213 244 aaKnown RBP2.55□□□□□ -2
HSK3YKL138C-A ZPS1Q12512 249 aa2.55□□□□□ -2
HSK3YKL138C-A HOP1P20050 605 aa2.54□□□□□ -2
HSK3YKL138C-A PAF1P38351 445 aa2.54□□□□□ -2
HSK3YKL138C-A RIM4P38741 713 aa2.54□□□□□ -2
HSK3YKL138C-A LRO1P40345 661 aa2.54□□□□□ -2
HSK3YKL138C-A YFL015CP43578 164 aa2.54□□□□□ -2
HSK3YKL138C-A SAP4P53036 818 aa2.54□□□□□ -2
HSK3YKL138C-A PTA1Q01329 785 aaPredicted RBP2.54□□□□□ -2
HSK3YKL138C-A NGL1Q08213 363 aaKnown RBP2.54□□□□□ -2
HSK3YKL138C-A PCL8Q08966 492 aa2.54□□□□□ -2
HSK3YKL138C-A FAP7Q12055 197 aaPredicted RBP2.54□□□□□ -2
HSK3YKL138C-A NOP56Q12460 504 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
HSK3YKL138C-A RNR3P21672 869 aaKnown RBP2.53□□□□□ -2
HSK3YKL138C-A RGT1P32862 1170 aa2.53□□□□□ -2
HSK3YKL138C-A DID4P36108 232 aa2.53□□□□□ -2
HSK3YKL138C-A YEN1P40028 759 aa2.53□□□□□ -2
HSK3YKL138C-A GPP2P40106 250 aaKnown RBP2.53□□□□□ -2
HSK3YKL138C-A BST1P43571 1029 aa2.53□□□□□ -2
HSK3YKL138C-A COQ6P53318 479 aa2.53□□□□□ -2
HSK3YKL138C-A USA1Q03714 838 aa2.53□□□□□ -2
HSK3YKL138C-A ECM32P32644 1121 aaKnown RBP2.52□□□□□ -2.01
HSK3YKL138C-A PIH1P38768 344 aa2.52□□□□□ -2.01
HSK3YKL138C-A EXO1P39875 702 aa2.52□□□□□ -2.01
HSK3YKL138C-A YEL025CP39991 1188 aa2.52□□□□□ -2.01
HSK3YKL138C-A THI6P41835 540 aa2.52□□□□□ -2.01
HSK3YKL138C-A NET1P47035 1189 aa2.52□□□□□ -2.01
HSK3YKL138C-A BPL1P48445 690 aaPredicted RBP2.52□□□□□ -2.01
HSK3YKL138C-A GEP3Q08622 556 aa2.52□□□□□ -2.01
HSK3YKL138C-A YPL216WQ08964 1102 aa2.52□□□□□ -2.01
HSK3YKL138C-A HEM1P09950 548 aaPredicted RBP2.51□□□□□ -2.01
HSK3YKL138C-A PTP1P25044 335 aa2.51□□□□□ -2.01
HSK3YKL138C-A DGR2P32330 852 aa2.51□□□□□ -2.01
HSK3YKL138C-A EAF5P39995 279 aa2.51□□□□□ -2.01
HSK3YKL138C-A LTP1P40347 161 aa2.51□□□□□ -2.01
HSK3YKL138C-A IRC5P43610 853 aa2.51□□□□□ -2.01
HSK3YKL138C-A STB2P46679 850 aa2.51□□□□□ -2.01
HSK3YKL138C-A YNL092WP53934 400 aa2.51□□□□□ -2.01
HSK3YKL138C-A CEF1Q03654 590 aaPredicted RBP2.51□□□□□ -2.01
HSK3YKL138C-A AIM41Q12032 185 aa2.51□□□□□ -2.01
HSK3YKL138C-A YPR027CQ12079 277 aa2.51□□□□□ -2.01
HSK3YKL138C-A PRS5Q12265 496 aaKnown RBP2.51□□□□□ -2.01
HSK3YKL138C-A RGT2Q12300 763 aa2.51□□□□□ -2.01
HSK3YKL138C-A YEL076C-AP0CX16 216 aa2.5□□□□□ -2.01
HSK3YKL138C-A YLR464WP0CX17 216 aa2.5□□□□□ -2.01
HSK3YKL138C-A PCK1P10963 549 aa2.5□□□□□ -2.01
HSK3YKL138C-A WHI2P12611 486 aa2.5□□□□□ -2.01
HSK3YKL138C-A VPS33P20795 691 aa2.5□□□□□ -2.01
HSK3YKL138C-A YJU2P28320 278 aaPredicted RBP2.5□□□□□ -2.01
HSK3YKL138C-A EUG1P32474 517 aa2.5□□□□□ -2.01
HSK3YKL138C-A DHR2P36009 735 aaPredicted RBP2.5□□□□□ -2.01
HSK3YKL138C-A YJL193WP39542 402 aa2.5□□□□□ -2.01
HSK3YKL138C-A YEL076CP39971 216 aa2.5□□□□□ -2.01
HSK3YKL138C-A NIT2P47016 307 aa2.5□□□□□ -2.01
HSK3YKL138C-A YJL043WP47053 257 aa2.5□□□□□ -2.01
HSK3YKL138C-A PEF1P53238 335 aa2.5□□□□□ -2.01
HSK3YKL138C-A ATP23P53722 227 aa2.5□□□□□ -2.01
HSK3YKL138C-A ECM38Q05902 660 aaPredicted RBP2.5□□□□□ -2.01
HSK3YKL138C-A YDL073WQ07454 984 aa2.5□□□□□ -2.01
HSK3YKL138C-A CIR2Q08822 631 aa2.5□□□□□ -2.01
HSK3YKL138C-A YOR378WQ08902 515 aa2.5□□□□□ -2.01
HSK3YKL138C-A RTK1Q12100 620 aaPredicted RBP2.5□□□□□ -2.01
HSK3YKL138C-A YLR111WQ12528 110 aa2.5□□□□□ -2.01
HSK3YKL138C-A Q0010Q9ZZX9 128 aa2.5□□□□□ -2.01
HSK3YKL138C-A ARG1P22768 420 aa2.49□□□□□ -2.01
HSK3YKL138C-A CAP1P28495 268 aaKnown RBP2.49□□□□□ -2.01
HSK3YKL138C-A BEM3P32873 1128 aa2.49□□□□□ -2.01
HSK3YKL138C-A RPC34P32910 317 aa2.49□□□□□ -2.01
HSK3YKL138C-A CCL1P37366 393 aa2.49□□□□□ -2.01
HSK3YKL138C-A GRX7P38068 203 aa2.49□□□□□ -2.01
HSK3YKL138C-A ENP1P38333 483 aaKnown RBP2.49□□□□□ -2.01
HSK3YKL138C-A ULP2P40537 1034 aaPredicted RBP2.49□□□□□ -2.01
HSK3YKL138C-A YJR120WP47157 116 aa2.49□□□□□ -2.01
HSK3YKL138C-A RNR4P49723 345 aaKnown RBP2.49□□□□□ -2.01
HSK3YKL138C-A RTS3P53289 263 aa2.49□□□□□ -2.01
HSK3YKL138C-A STP1Q00947 519 aa2.49□□□□□ -2.01
HSK3YKL138C-A RSC9Q03124 581 aa2.49□□□□□ -2.01
HSK3YKL138C-A SKY1Q03656 742 aa2.49□□□□□ -2.01
HSK3YKL138C-A TDA9Q04545 1251 aa2.49□□□□□ -2.01
HSK3YKL138C-A TRE2Q08693 809 aa2.49□□□□□ -2.01
HSK3YKL138C-A CWC2Q12046 339 aaPredicted RBP2.49□□□□□ -2.01
HSK3YKL138C-A TOP1P04786 769 aa2.48□□□□□ -2.01
HSK3YKL138C-A YPK1P12688 680 aaKnown RBP2.48□□□□□ -2.01
HSK3YKL138C-A DSS4P32601 143 aa2.48□□□□□ -2.01
HSK3YKL138C-A STB5P38699 743 aa2.48□□□□□ -2.01
HSK3YKL138C-A TDA10P42938 290 aa2.48□□□□□ -2.01
HSK3YKL138C-A DUG1P43616 481 aaKnown RBP2.48□□□□□ -2.01
HSK3YKL138C-A SAE2P46946 345 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms