RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W HSH155P49955 971 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W ALT1P52893 592 aa6.69□□□□□ -1.34
PRE3YJL001W RNH70P53331 553 aa6.69□□□□□ -1.34
PRE3YJL001W SIW14P53965 281 aa6.69□□□□□ -1.34
PRE3YJL001W DAL7P21826 554 aa6.68□□□□□ -1.34
PRE3YJL001W GPI10P30777 616 aa6.68□□□□□ -1.34
PRE3YJL001W SWE1P32944 819 aa6.68□□□□□ -1.34
PRE3YJL001W TSA1P34760 196 aaKnown RBP6.68□□□□□ -1.34
PRE3YJL001W YKL069WP36088 180 aa6.68□□□□□ -1.34
PRE3YJL001W LEM3P42838 414 aa6.68□□□□□ -1.34
PRE3YJL001W RMD8P43620 662 aa6.68□□□□□ -1.34
PRE3YJL001W NBP1P52919 319 aaPredicted RBP6.68□□□□□ -1.34
PRE3YJL001W NAN1Q02931 896 aaKnown RBP6.68□□□□□ -1.34
PRE3YJL001W RPN4Q03465 531 aa6.68□□□□□ -1.34
PRE3YJL001W HAS1Q03532 505 aaKnown RBP6.68□□□□□ -1.34
PRE3YJL001W COG8Q04632 607 aa6.68□□□□□ -1.34
PRE3YJL001W PRM6Q04705 352 aa6.68□□□□□ -1.34
PRE3YJL001W GPM2Q12008 311 aa6.68□□□□□ -1.34
PRE3YJL001W CHS1P08004 1131 aa6.67□□□□□ -1.34
PRE3YJL001W RPL19AP0CX82 189 aaKnown RBP6.67□□□□□ -1.34
PRE3YJL001W RPL19BP0CX83 189 aaPredicted RBP6.67□□□□□ -1.34
PRE3YJL001W MUD1P32605 298 aaKnown RBP6.67□□□□□ -1.34
PRE3YJL001W TKL2P33315 681 aa6.67□□□□□ -1.34
PRE3YJL001W TIF5P38431 405 aaKnown RBP6.67□□□□□ -1.34
PRE3YJL001W TAT2P38967 592 aa6.67□□□□□ -1.34
PRE3YJL001W DOT6P40059 670 aaKnown RBP6.67□□□□□ -1.34
PRE3YJL001W LCB2P40970 561 aa6.67□□□□□ -1.34
PRE3YJL001W DAS1P47005 663 aa6.67□□□□□ -1.34
PRE3YJL001W IMP4P53941 290 aaKnown RBP6.67□□□□□ -1.34
PRE3YJL001W WAR1Q03631 944 aa6.67□□□□□ -1.34
PRE3YJL001W GYL1Q04322 720 aa6.67□□□□□ -1.34
PRE3YJL001W FLC1Q08967 793 aa6.67□□□□□ -1.34
PRE3YJL001W TAF10Q12030 206 aa6.67□□□□□ -1.34
PRE3YJL001W NDJ1Q12366 352 aa6.67□□□□□ -1.34
PRE3YJL001W TY1A-LR4P0C2I8 440 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W TY1A-DR6P0CX70 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-ER1P0CX71 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-LR2P0CX72 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-PLP0CX73 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-JR1P0CX74 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-LR3P0CX75 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-ML2P0CX76 440 aa6.66□□□□□ -1.34
PRE3YJL001W GAC1P28006 793 aa6.66□□□□□ -1.34
PRE3YJL001W PPG1P32838 368 aa6.66□□□□□ -1.34
PRE3YJL001W SHE3P38272 425 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W SNF7P39929 240 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W TYW3P53177 273 aa6.66□□□□□ -1.34
PRE3YJL001W SOK2P53438 785 aaPredicted RBP6.66□□□□□ -1.34
PRE3YJL001W HXT15P54854 567 aa6.66□□□□□ -1.34
PRE3YJL001W CEG1Q01159 459 aaPredicted RBP6.66□□□□□ -1.34
PRE3YJL001W SPO20Q04359 397 aa6.66□□□□□ -1.34
PRE3YJL001W YPR027CQ12079 277 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-GR1Q12085 440 aa6.66□□□□□ -1.34
PRE3YJL001W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W TY1A-OLQ92392 440 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W GCN1P33892 2672 aaKnown RBP6.66□□□□□ -1.34
PRE3YJL001W NAT1P12945 854 aaKnown RBP6.65□□□□□ -1.34
PRE3YJL001W LYP1P32487 611 aa6.65□□□□□ -1.34
PRE3YJL001W KDX1P36005 433 aa6.65□□□□□ -1.34
PRE3YJL001W MAL33P38157 468 aa6.65□□□□□ -1.34
PRE3YJL001W YPT35P38815 214 aaKnown RBP6.65□□□□□ -1.34
PRE3YJL001W NUP60P39705 539 aa6.65□□□□□ -1.34
PRE3YJL001W TIM54P47045 478 aa6.65□□□□□ -1.34
PRE3YJL001W NMA2P53204 395 aa6.65□□□□□ -1.34
PRE3YJL001W DOS2P54858 310 aa6.65□□□□□ -1.34
PRE3YJL001W DON1Q05610 365 aa6.65□□□□□ -1.34
PRE3YJL001W TCO89Q08921 799 aa6.65□□□□□ -1.34
PRE3YJL001W YIG1Q08956 461 aa6.65□□□□□ -1.34
PRE3YJL001W REV1P12689 985 aa6.64□□□□□ -1.35
PRE3YJL001W PBP2P38151 413 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
PRE3YJL001W GIP4P39732 760 aa6.64□□□□□ -1.35
PRE3YJL001W FTR1P40088 404 aa6.64□□□□□ -1.35
PRE3YJL001W YIL161WP40449 235 aaKnown RBP6.64□□□□□ -1.35
PRE3YJL001W GCN5Q03330 439 aa6.64□□□□□ -1.35
PRE3YJL001W EAF1Q06337 982 aa6.64□□□□□ -1.35
PRE3YJL001W PDC5P16467 563 aaKnown RBP6.63□□□□□ -1.35
PRE3YJL001W FPR1P20081 114 aaKnown RBP6.63□□□□□ -1.35
PRE3YJL001W KIN3P22209 435 aa6.63□□□□□ -1.35
PRE3YJL001W HIR1P32479 840 aa6.63□□□□□ -1.35
PRE3YJL001W FRE1P32791 686 aa6.63□□□□□ -1.35
PRE3YJL001W STE5P32917 917 aa6.63□□□□□ -1.35
PRE3YJL001W PIN4P34217 668 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
PRE3YJL001W SPC42P36094 363 aa6.63□□□□□ -1.35
PRE3YJL001W TCD2P36101 447 aaKnown RBP6.63□□□□□ -1.35
PRE3YJL001W ATG14P38270 344 aa6.63□□□□□ -1.35
PRE3YJL001W SLS1P42900 643 aa6.63□□□□□ -1.35
PRE3YJL001W UTP5Q04177 643 aaKnown RBP6.63□□□□□ -1.35
PRE3YJL001W SEG1Q04279 960 aa6.63□□□□□ -1.35
PRE3YJL001W ECM22Q05958 814 aaPredicted RBP6.63□□□□□ -1.35
PRE3YJL001W PSR2Q07949 397 aa6.63□□□□□ -1.35
PRE3YJL001W GIS3Q12418 502 aa6.63□□□□□ -1.35
PRE3YJL001W IME1P21190 360 aa6.62□□□□□ -1.35
PRE3YJL001W AGP1P25376 633 aa6.62□□□□□ -1.35
PRE3YJL001W KNS1P32350 737 aaPredicted RBP6.62□□□□□ -1.35
PRE3YJL001W MKK2P32491 506 aa6.62□□□□□ -1.35
PRE3YJL001W DSS4P32601 143 aa6.62□□□□□ -1.35
PRE3YJL001W ADD66P36040 267 aa6.62□□□□□ -1.35
PRE3YJL001W ARL1P38116 183 aaKnown RBP6.62□□□□□ -1.35
PRE3YJL001W YBR225WP38321 900 aa6.62□□□□□ -1.35
PRE3YJL001W GGA2P38817 585 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms