RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W PXA1P41909 870 aa5.32□□□□□ -1.56
RRP17YDR412W UME1Q03010 460 aa5.32□□□□□ -1.56
RRP17YDR412W YHM2Q04013 314 aa5.32□□□□□ -1.56
RRP17YDR412W TY1B-JR2P47100 1755 aaKnown RBP5.32□□□□□ -1.56
RRP17YDR412W TY1B-ER2Q03619 1755 aa5.32□□□□□ -1.56
RRP17YDR412W TY1B-MR1Q04214 1755 aa5.32□□□□□ -1.56
RRP17YDR412W TY1B-MR2Q04670 1755 aaKnown RBP5.32□□□□□ -1.56
RRP17YDR412W TY1B-LR1Q12088 1755 aaKnown RBP5.32□□□□□ -1.56
RRP17YDR412W TY1B-NL1Q12112 1755 aa5.32□□□□□ -1.56
RRP17YDR412W TY1B-GR1Q12141 1755 aa5.32□□□□□ -1.56
RRP17YDR412W TY1B-BLQ12490 1755 aa5.32□□□□□ -1.56
RRP17YDR412W TPK2P06245 380 aa5.31□□□□□ -1.56
RRP17YDR412W HOM2P13663 365 aaKnown RBP5.31□□□□□ -1.56
RRP17YDR412W RPA135P22138 1203 aaKnown RBP5.31□□□□□ -1.56
RRP17YDR412W MRPL7P36519 292 aa5.31□□□□□ -1.56
RRP17YDR412W FMP30Q02883 468 aa5.31□□□□□ -1.56
RRP17YDR412W ARG7Q04728 441 aa5.31□□□□□ -1.56
RRP17YDR412W MDM20Q12387 796 aaKnown RBP5.31□□□□□ -1.56
RRP17YDR412W NTH1P32356 751 aa5.3□□□□□ -1.56
RRP17YDR412W SER1P33330 395 aaKnown RBP5.3□□□□□ -1.56
RRP17YDR412W EHT1P38295 451 aa5.3□□□□□ -1.56
RRP17YDR412W DUN1P39009 513 aa5.3□□□□□ -1.56
RRP17YDR412W YDL183CP48569 320 aa5.3□□□□□ -1.56
RRP17YDR412W TAF4P50105 388 aa5.3□□□□□ -1.56
RRP17YDR412W SPO1P53541 631 aa5.3□□□□□ -1.56
RRP17YDR412W NUP157P40064 1391 aaKnown RBP5.29□□□□□ -1.56
RRP17YDR412W ATP12P22135 325 aa5.29□□□□□ -1.56
RRP17YDR412W PRM2P40534 656 aa5.29□□□□□ -1.56
RRP17YDR412W GZF3P42944 551 aaKnown RBP5.29□□□□□ -1.56
RRP17YDR412W TAX4P47030 604 aa5.29□□□□□ -1.56
RRP17YDR412W BFA1P47113 574 aa5.29□□□□□ -1.56
RRP17YDR412W YGL117WP53133 265 aa5.29□□□□□ -1.56
RRP17YDR412W ULA1Q12059 462 aa5.29□□□□□ -1.56
RRP17YDR412W SNQ2P32568 1501 aaKnown RBP5.28□□□□□ -1.56
RRP17YDR412W NUP145P49687 1317 aa5.28□□□□□ -1.56
RRP17YDR412W ERG11P10614 530 aa5.28□□□□□ -1.56
RRP17YDR412W UGP1P32861 499 aaKnown RBP5.28□□□□□ -1.56
RRP17YDR412W PIP2P52960 996 aa5.28□□□□□ -1.56
RRP17YDR412W YGR054WP53235 642 aaKnown RBP5.28□□□□□ -1.56
RRP17YDR412W FDC1Q03034 503 aa5.28□□□□□ -1.56
RRP17YDR412W RIM13Q03792 727 aa5.28□□□□□ -1.56
RRP17YDR412W APM4Q99186 491 aa5.28□□□□□ -1.56
RRP17YDR412W NUP170P38181 1502 aa5.28□□□□□ -1.56
RRP17YDR412W MNN11P46985 422 aaKnown RBP5.27□□□□□ -1.57
RRP17YDR412W YIP4P53093 235 aa5.27□□□□□ -1.57
RRP17YDR412W YTM1Q12024 460 aaPredicted RBP5.27□□□□□ -1.57
RRP17YDR412W AIM44Q99299 758 aa5.27□□□□□ -1.57
RRP17YDR412W RPO21P04050 1733 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W ADE5,7P07244 802 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W PRP22P24384 1145 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W PPE1P38796 400 aa5.26□□□□□ -1.57
RRP17YDR412W NGL2Q03264 515 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W EFR3Q03653 782 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W UTP14Q04500 899 aaKnown RBP5.26□□□□□ -1.57
RRP17YDR412W NTE1Q04958 1679 aa5.26□□□□□ -1.57
RRP17YDR412W AAD3P25612 363 aa5.25□□□□□ -1.57
RRP17YDR412W MF(ALPHA)2P32435 120 aa5.25□□□□□ -1.57
RRP17YDR412W HXT4P32467 576 aa5.25□□□□□ -1.57
RRP17YDR412W ORC2P32833 620 aa5.25□□□□□ -1.57
RRP17YDR412W MBR1P23493 339 aa5.24□□□□□ -1.57
RRP17YDR412W YHR033WP38690 423 aa5.24□□□□□ -1.57
RRP17YDR412W PMT3P47190 753 aa5.24□□□□□ -1.57
RRP17YDR412W YGR161W-CQ3E744 92 aa5.24□□□□□ -1.57
RRP17YDR412W NUP1P20676 1076 aa5.23□□□□□ -1.57
RRP17YDR412W YGR237CP50089 785 aa5.23□□□□□ -1.57
RRP17YDR412W CPR8P53728 308 aa5.23□□□□□ -1.57
RRP17YDR412W RPS15Q01855 142 aaKnown RBP5.23□□□□□ -1.57
RRP17YDR412W MFM1Q02783 413 aa5.23□□□□□ -1.57
RRP17YDR412W NSE5Q03718 556 aa5.23□□□□□ -1.57
RRP17YDR412W HOF1Q05080 669 aa5.23□□□□□ -1.57
RRP17YDR412W AFT2Q08957 416 aa5.23□□□□□ -1.57
RRP17YDR412W IQG1Q12280 1495 aa5.23□□□□□ -1.57
RRP17YDR412W SPO14P36126 1683 aa5.22□□□□□ -1.57
RRP17YDR412W CNE1P27825 502 aa5.22□□□□□ -1.57
RRP17YDR412W RMA1P36001 430 aaKnown RBP5.22□□□□□ -1.57
RRP17YDR412W YAP3P38749 330 aa5.22□□□□□ -1.57
RRP17YDR412W PTA1Q01329 785 aaPredicted RBP5.22□□□□□ -1.57
RRP17YDR412W PPN1Q04119 674 aa5.22□□□□□ -1.57
RRP17YDR412W HLR1Q04429 423 aa5.22□□□□□ -1.57
RRP17YDR412W ARR3Q06598 404 aa5.22□□□□□ -1.57
RRP17YDR412W YCG1Q06680 1035 aa5.22□□□□□ -1.57
RRP17YDR412W FAP7Q12055 197 aaPredicted RBP5.22□□□□□ -1.57
RRP17YDR412W FRE7Q12333 620 aa5.22□□□□□ -1.57
RRP17YDR412W AI5_ALPHAQ9ZZX1 630 aa5.22□□□□□ -1.57
RRP17YDR412W ULS1Q08562 1619 aa5.22□□□□□ -1.57
RRP17YDR412W PDR10P51533 1564 aa5.21□□□□□ -1.57
RRP17YDR412W HMG2P12684 1045 aa5.21□□□□□ -1.58
RRP17YDR412W ACO1P19414 778 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
RRP17YDR412W HOT13P36078 116 aa5.21□□□□□ -1.58
RRP17YDR412W BUD17P53727 317 aa5.21□□□□□ -1.58
RRP17YDR412W YNL018CP53976 612 aa5.21□□□□□ -1.58
RRP17YDR412W DNF2Q12675 1612 aa5.21□□□□□ -1.58
RRP17YDR412W PDR12Q02785 1511 aa5.2□□□□□ -1.58
RRP17YDR412W PMA2P19657 947 aa5.2□□□□□ -1.58
RRP17YDR412W DID4P36108 232 aa5.2□□□□□ -1.58
RRP17YDR412W SNM1P40993 198 aa5.2□□□□□ -1.58
RRP17YDR412W SEG1Q04279 960 aa5.2□□□□□ -1.58
RRP17YDR412W NGL1Q08213 363 aaKnown RBP5.2□□□□□ -1.58
RRP17YDR412W SLK19Q08581 821 aaKnown RBP5.2□□□□□ -1.58
RRP17YDR412W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms