RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 KIF28PB7ZC32 967 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 UBAP1LF5GYI3 381 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 CCDC24Q8N4L8 307 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-229ENST00000641891 ZSWIM5Q9P217 1185 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 ZNF804BA4D1E1 1349 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-229ENST00000641891 TDO2P48775 406 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 TMEM67Q5HYA8 995 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 LUZP1Q86V48 1076 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 FAM200AQ8TCP9 573 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 ABCF2Q9UG63 623 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 CLIC4Q9Y696 253 aa19.81■□□□□ 0.76
PHGDH-229ENST00000641891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.81■□□□□ 0.762e-6■■■■■ 31.1
PHGDH-229ENST00000641891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.8■□□□□ 0.76
PHGDH-229ENST00000641891 CYP7A1P22680 504 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 ME1P48163 572 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 ATL3Q6DD88 541 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 PHKBQ93100 1093 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 TMEM87BQ96K49 555 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 BSDC1Q9NW68 430 aaPredicted RBP19.8■□□□□ 0.76
PHGDH-229ENST00000641891 MINPP1Q9UNW1 487 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 BTAF1O14981 1849 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 RRP12Q5JTH9 1297 aaKnown RBP19.8■□□□□ 0.76
PHGDH-229ENST00000641891 AKNAD1Q5T1N1 836 aa19.8■□□□□ 0.76
PHGDH-229ENST00000641891 ZNF830Q96NB3 372 aaPredicted RBP19.8■□□□□ 0.76
PHGDH-229ENST00000641891 ECM29Q5VYK3 1845 aa19.79■□□□□ 0.76
PHGDH-229ENST00000641891 ZNF500O60304 480 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-229ENST00000641891 SNW1Q13573 536 aaKnown RBP19.79■□□□□ 0.76
PHGDH-229ENST00000641891 CBX8Q9HC52 389 aa19.79■□□□□ 0.76
PHGDH-229ENST00000641891 RTEL1Q9NZ71 1219 aa19.79■□□□□ 0.76
PHGDH-229ENST00000641891 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
PHGDH-229ENST00000641891 GNPATO15228 680 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 ZBTB43O43298 467 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 KLRK1P26718 216 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 ZKSCAN3Q9BRR0 538 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 FAM217BQ9NTX9 383 aaPredicted RBP19.78■□□□□ 0.76
PHGDH-229ENST00000641891 RAI14Q9P0K7 980 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 PCDHA7Q9UN72 937 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 UBE2Q2LH0YL09 131 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 KIF23Q02241 960 aaPredicted RBP19.78■□□□□ 0.76
PHGDH-229ENST00000641891 MFSD6Q6ZSS7 791 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 FSIP1Q8NA03 581 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 SDR42E1Q8WUS8 393 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 ALG1Q9BT22 464 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 TOMM22Q9NS69 142 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 NARFQ9UHQ1 456 aa19.78■□□□□ 0.76
PHGDH-229ENST00000641891 SMIM22K7EJ46 135 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 RANBP6O60518 1105 aaKnown RBP19.77■□□□□ 0.76
PHGDH-229ENST00000641891 GNAT2P19087 354 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 UBE4AQ14139 1066 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 SASS6Q6UVJ0 657 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 SGMS1Q86VZ5 419 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 NACAP1Q9BZK3 213 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 DNAJC25Q9H1X3 360 aa19.77■□□□□ 0.76
PHGDH-229ENST00000641891 RPS6KA4O75676 772 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 SLC10A5Q5PT55 438 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 MYSM1Q5VVJ2 828 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 CCDC73Q6ZRK6 1079 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 LINC00301Q8NCQ3 95 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 ENGASEQ8NFI3 743 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 STAG1Q8WVM7 1258 aa19.77■□□□□ 0.75
PHGDH-229ENST00000641891 NTRK3Q16288 839 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-229ENST00000641891 FAM84BQ96KN1 310 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-229ENST00000641891 CNNM2Q9H8M5 875 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 USP21Q9UK80 565 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 CACNA1SQ13698 1873 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 STK38Q15208 465 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 NBPF5PQ86XG9 351 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-229ENST00000641891 VPS37DQ86XT2 251 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 SETDB2Q96T68 719 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 KRT23Q9C075 422 aa19.76■□□□□ 0.75
PHGDH-229ENST00000641891 GNL3LQ9NVN8 582 aaKnown RBP19.76■□□□□ 0.75
PHGDH-229ENST00000641891 CCNL1Q9UK58 526 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-229ENST00000641891 A0A087WWV3 80 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 MAGEB6P1A0A0J9YX57 407 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 CDKL5O76039 1030 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 LIFRP42702 1097 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 FAM160A1Q05DH4 1040 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 CAVIN4Q5BKX8 364 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 RC3H1Q5TC82 1133 aaKnown RBP19.75■□□□□ 0.75
PHGDH-229ENST00000641891 BRAPQ7Z569 592 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 TTC12Q9H892 705 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-229ENST00000641891 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 COL24A1Q17RW2 1714 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 NHSQ6T4R5 1651 aa19.75■□□□□ 0.75
PHGDH-229ENST00000641891 CCDC69A6NI79 296 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 ZPR1O75312 459 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 OFD1O75665 1012 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
PHGDH-229ENST00000641891 KRT40Q6A162 431 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 ZNF384Q8TF68 577 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 A0A1B0GVL5 298 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 MINDY4BA8MYZ0 360 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 PPARAQ07869 468 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms