RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 METAP2P50579 478 aaKnown RBP eCLIP20.91■□□□□ 0.941e-6■■□□□ 12.1
PHGDH-226ENST00000641756 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
PHGDH-226ENST00000641756 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-226ENST00000641756 IGDCC4Q8TDY8 1250 aa20.91■□□□□ 0.94
PHGDH-226ENST00000641756 FUCA2Q9BTY2 467 aa20.91■□□□□ 0.94
PHGDH-226ENST00000641756 DACT1Q9NYF0 836 aa20.91■□□□□ 0.94
PHGDH-226ENST00000641756 ESPNB1AK53 854 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 TMEM67Q5HYA8 995 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 RRP12Q5JTH9 1297 aaKnown RBP20.9■□□□□ 0.94
PHGDH-226ENST00000641756 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 TMEM87BQ96K49 555 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 NUP62CLQ9H1M0 184 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 TOMM22Q9NS69 142 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 GJB4Q9NTQ9 266 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 TFCP2L1Q9NZI6 479 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 ZSWIM5Q9P217 1185 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 APOA5Q6Q788 366 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 MFSD6Q6ZSS7 791 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 USP28Q96RU2 1077 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 MYL10Q9BUA6 226 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 LY9Q9HBG7 655 aa20.9■□□□□ 0.94
PHGDH-226ENST00000641756 MAGEB6P1A0A0J9YX57 407 aa20.89■□□□□ 0.94
PHGDH-226ENST00000641756 LRRC4BQ9NT99 713 aa20.89■□□□□ 0.94
PHGDH-226ENST00000641756 TIAM2Q8IVF5 1701 aa20.89■□□□□ 0.93
PHGDH-226ENST00000641756 TM4SF1P30408 202 aa20.89■□□□□ 0.93
PHGDH-226ENST00000641756 FBXO33Q7Z6M2 555 aa20.89■□□□□ 0.93
PHGDH-226ENST00000641756 TNRC6CQ9HCJ0 1690 aaKnown RBP20.89■□□□□ 0.93
PHGDH-226ENST00000641756 IFIT3O14879 490 aaKnown RBP20.88■□□□□ 0.93
PHGDH-226ENST00000641756 CDC27P30260 824 aa20.88■□□□□ 0.93
PHGDH-226ENST00000641756 SLC51AQ86UW1 340 aa20.88■□□□□ 0.93
PHGDH-226ENST00000641756 ZNF396Q96N95 335 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-226ENST00000641756 TAOK2Q9UL54 1235 aa20.88■□□□□ 0.93
PHGDH-226ENST00000641756 CACNA1SQ13698 1873 aa20.88■□□□□ 0.93
PHGDH-226ENST00000641756 NR1I2O75469 434 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 DYNLL1P63167 89 aaKnown RBP20.87■□□□□ 0.93
PHGDH-226ENST00000641756 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 STAG1Q8WVM7 1258 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 KRT23Q9C075 422 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 CNNM2Q9H8M5 875 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 TRPC5Q9UL62 973 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-226ENST00000641756 ZBTB43O43298 467 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-226ENST00000641756 NFIXQ14938 502 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 MAP3K11Q16584 847 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 FBXO18Q8NFZ0 1043 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 ZNF384Q8TF68 577 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 ANKRD2Q9GZV1 360 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
PHGDH-226ENST00000641756 MINDY4BA8MYZ0 360 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 PPARAQ07869 468 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 CKAP2LQ8IYA6 745 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 AIFM3Q96NN9 605 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
PHGDH-226ENST00000641756 TNMDQ9H2S6 317 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 GOLGA8AA7E2F4 631 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 SMIM22K7EJ46 135 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 POLR3DP05423 398 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-226ENST00000641756 HIBADHP31937 336 aaKnown RBP20.86■□□□□ 0.93
PHGDH-226ENST00000641756 SGMS1Q86VZ5 419 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 PHKBQ93100 1093 aa20.86■□□□□ 0.93
PHGDH-226ENST00000641756 DDX19AQ9NUU7 478 aaKnown RBP20.86■□□□□ 0.93
PHGDH-226ENST00000641756 CHAF1AQ13111 956 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-226ENST00000641756 TXNRD3Q86VQ6 643 aa20.85■□□□□ 0.93
PHGDH-226ENST00000641756 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-226ENST00000641756 JAG2Q9Y219 1238 aa20.85■□□□□ 0.93
PHGDH-226ENST00000641756 CCDC69A6NI79 296 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 CCDC192P0DO97 292 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 CLSTN2Q9H4D0 955 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 SLC12A7Q9Y666 1083 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
PHGDH-226ENST00000641756 KIF28PB7ZC32 967 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 LIFRP42702 1097 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 UVSSAQ2YD98 709 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 ATL3Q6DD88 541 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 ALG1Q9BT22 464 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 FAM217BQ9NTX9 383 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-226ENST00000641756 MYH13Q9UKX3 1938 aa20.84■□□□□ 0.93
PHGDH-226ENST00000641756 CDKL5O76039 1030 aa20.83■□□□□ 0.93
PHGDH-226ENST00000641756 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
PHGDH-226ENST00000641756 USP25Q9UHP3 1055 aa20.83■□□□□ 0.93
PHGDH-226ENST00000641756 SEMA3EO15041 775 aa20.83■□□□□ 0.92
PHGDH-226ENST00000641756 CLCN1P35523 988 aa20.83■□□□□ 0.92
PHGDH-226ENST00000641756 CPLX2Q6PUV4 134 aaKnown RBP20.83■□□□□ 0.92
PHGDH-226ENST00000641756 CCAR1Q8IX12 1150 aaKnown RBP20.83■□□□□ 0.92
PHGDH-226ENST00000641756 NSUN4Q96CB9 384 aaKnown RBP20.83■□□□□ 0.92
PHGDH-226ENST00000641756 CYP2D7A0A087X1C5 515 aa20.82■□□□□ 0.92
PHGDH-226ENST00000641756 RANBP6O60518 1105 aaKnown RBP20.82■□□□□ 0.92
PHGDH-226ENST00000641756 MECOMQ03112 1051 aa20.82■□□□□ 0.92
PHGDH-226ENST00000641756 NTRK3Q16288 839 aa20.82■□□□□ 0.92
PHGDH-226ENST00000641756 GOLPH3LQ9H4A5 285 aa20.82■□□□□ 0.92
PHGDH-226ENST00000641756 RNF41Q9H4P4 317 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-226ENST00000641756 QTRT2Q9H974 415 aaKnown RBP20.82■□□□□ 0.92
PHGDH-226ENST00000641756 UBE2Q2LH0YL09 131 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 ME1P48163 572 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms