RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SCRN1Q12765 414 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 GIMAP6Q6P9H5 292 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 DZIP1Q86YF9 867 aaKnown RBP19.37■□□□□ 0.69
PHGDH-216ENST00000641375 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-216ENST00000641375 CD209Q9NNX6 404 aa19.37■□□□□ 0.69
PHGDH-216ENST00000641375 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-216ENST00000641375 LDHBP07195 334 aaKnown RBP19.36■□□□□ 0.69
PHGDH-216ENST00000641375 BAG6P46379 1132 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 LARP1BQ659C4 914 aaKnown RBP19.36■□□□□ 0.69
PHGDH-216ENST00000641375 KRT23Q9C075 422 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 POLLQ9UGP5 575 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 PDIA3P30101 505 aaKnown RBP19.36■□□□□ 0.69
PHGDH-216ENST00000641375 ANTXR2P58335 489 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 MFSD6Q6ZSS7 791 aa19.36■□□□□ 0.69
PHGDH-216ENST00000641375 RNF41Q9H4P4 317 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-216ENST00000641375 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
PHGDH-216ENST00000641375 SDR42E1Q8WUS8 393 aa19.35■□□□□ 0.69
PHGDH-216ENST00000641375 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
PHGDH-216ENST00000641375 TMEM87BQ96K49 555 aa19.35■□□□□ 0.69
PHGDH-216ENST00000641375 GSTO1P78417 241 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 GPR101Q96P66 508 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 CRNKL1Q9BZJ0 848 aaKnown RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 ANGEL1Q9UNK9 670 aaKnown RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 KIF3AQ9Y496 699 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 NEDD4P46934 1319 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 B4E1Z4 1266 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 F13A1P00488 732 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 DYNLL1P63167 89 aaKnown RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 HMGN5P82970 282 aaKnown RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 PKNOX2Q96KN3 472 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 ANAPC4Q9UJX5 808 aa19.34■□□□□ 0.69
PHGDH-216ENST00000641375 NAP1L2Q9ULW6 460 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-216ENST00000641375 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.69
PHGDH-216ENST00000641375 PPARAQ07869 468 aa19.33■□□□□ 0.69
PHGDH-216ENST00000641375 SMARCC2Q8TAQ2 1214 aa19.33■□□□□ 0.69
PHGDH-216ENST00000641375 MTMR6Q9Y217 621 aa19.33■□□□□ 0.69
PHGDH-216ENST00000641375 JAG2Q9Y219 1238 aa19.33■□□□□ 0.69
PHGDH-216ENST00000641375 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.68
PHGDH-216ENST00000641375 MPNDQ8N594 471 aa19.33■□□□□ 0.68
PHGDH-216ENST00000641375 LMBRD1Q9NUN5 540 aa19.33■□□□□ 0.68
PHGDH-216ENST00000641375 AATFQ9NY61 560 aaKnown RBP eCLIP19.33■□□□□ 0.68
PHGDH-216ENST00000641375 H0YIN7 160 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 CYB5R4Q7L1T6 521 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 TBC1D22AQ8WUA7 517 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 ATP8A2Q9NTI2 1148 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 KLF18A0A0U1RQI7 1052 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-216ENST00000641375 LDHCP07864 332 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 FAM184AQ8NB25 1140 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 MTA3Q9BTC8 594 aa19.32■□□□□ 0.68
PHGDH-216ENST00000641375 SH2B2O14492 632 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-216ENST00000641375 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
PHGDH-216ENST00000641375 CCT2P78371 535 aaKnown RBP19.31■□□□□ 0.68
PHGDH-216ENST00000641375 KLHL40Q2TBA0 621 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 STYK1Q6J9G0 422 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 C2CD5Q86YS7 1000 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 NSUN7Q8NE18 718 aaKnown RBP19.31■□□□□ 0.68
PHGDH-216ENST00000641375 COA1Q9GZY4 146 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 TCHHQ07283 1943 aa19.31■□□□□ 0.68
PHGDH-216ENST00000641375 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 JAK2O60674 1132 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 KDM4AO75164 1064 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 SART3Q15020 963 aaKnown RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 DPP8Q6V1X1 898 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 ZNF622Q969S3 477 aaKnown RBP eCLIP19.3■□□□□ 0.682e-6■■■□□ 15.2
PHGDH-216ENST00000641375 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 DDX49Q9Y6V7 483 aaKnown RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 MYH2Q9UKX2 1941 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 PRPF40AO75400 957 aaKnown RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 BAG3O95817 575 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 LIFRP42702 1097 aa19.3■□□□□ 0.68
PHGDH-216ENST00000641375 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
PHGDH-216ENST00000641375 SGMS1Q86VZ5 419 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 IGDCC4Q8TDY8 1250 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 TOMM22Q9NS69 142 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 LAMB1P07942 1786 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 PTPDC1A2A3K4 754 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 DTNBO60941 627 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 CTDNEP1O95476 244 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 SLF2Q8IX21 1173 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 NCOA5Q9HCD5 579 aaKnown RBP19.29■□□□□ 0.68
PHGDH-216ENST00000641375 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-216ENST00000641375 FAM205AQ6ZU69 1335 aa19.29■□□□□ 0.68
PHGDH-216ENST00000641375 TMEM67Q5HYA8 995 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 MFSD14BQ5SR56 506 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 CTR9Q6PD62 1173 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 ESR2Q92731 530 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 EYA3Q99504 573 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 INCENPQ9NQS7 918 aa19.28■□□□□ 0.68
PHGDH-216ENST00000641375 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-216ENST00000641375 ERICH2A1L162 156 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 IFIT3O14879 490 aaKnown RBP19.27■□□□□ 0.68
PHGDH-216ENST00000641375 PPP4CP60510 307 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms