RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PPP4CP60510 307 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 MECOMQ03112 1051 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 ME3Q16798 604 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 SLFNL1Q499Z3 407 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 AKNAD1Q5T1N1 836 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
PHGDH-215ENST00000641371 MFSD6Q6ZSS7 791 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 STOX1Q6ZVD7 989 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 NOL8Q76FK4 1167 aaKnown RBP11.46□□□□□ -0.57
PHGDH-215ENST00000641371 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-215ENST00000641371 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-215ENST00000641371 TPCN1Q9ULQ1 816 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-215ENST00000641371 LAMB1P07942 1786 aa11.46□□□□□ -0.58
PHGDH-215ENST00000641371 KIF13BQ9NQT8 1826 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 ERICH2A1L162 156 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 G3V3G9 751 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 PRC1O43663 620 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 KLRK1P26718 216 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 PPP2R5BQ15173 497 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 SBK1Q52WX2 424 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 CCDC83Q8IWF9 413 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 BRF1Q92994 677 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■□□ 15.2
PHGDH-215ENST00000641371 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-215ENST00000641371 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 POLLQ9UGP5 575 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 ANGEL1Q9UNK9 670 aaKnown RBP11.45□□□□□ -0.58
PHGDH-215ENST00000641371 MYH2Q9UKX2 1941 aa11.45□□□□□ -0.58
PHGDH-215ENST00000641371 MROH7-TTC4A0A0A0MT08 1334 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 CDKL5O76039 1030 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 CPA1P15085 419 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 LIFRP42702 1097 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 HAND2P61296 217 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 PPARAQ07869 468 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 TXNRD3Q86VQ6 643 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 ESR2Q92731 530 aa11.44□□□□□ -0.58
PHGDH-215ENST00000641371 EPB41L4AQ9HCS5 686 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-215ENST00000641371 SRCAPQ6ZRS2 3230 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 STX6O43752 255 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 GJB2P29033 226 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 PRDX5P30044 214 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 SGMS1Q86VZ5 419 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 MIGA1Q8NAN2 632 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 TAF6LQ9Y6J9 622 aa11.43□□□□□ -0.58
PHGDH-215ENST00000641371 GAKO14976 1311 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 BAG4O95429 457 aaKnown RBP11.42□□□□□ -0.58
PHGDH-215ENST00000641371 FGRP09769 529 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 ZSCAN22P10073 491 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-215ENST00000641371 POLD1P28340 1107 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 TGFB2P61812 414 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
PHGDH-215ENST00000641371 PDE4BQ07343 736 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 MFSD14BQ5SR56 506 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 IQCA1Q86XH1 822 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 RTKN2Q8IZC4 609 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 FAM184AQ8NB25 1140 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 SMARCC2Q8TAQ2 1214 aa11.42□□□□□ -0.58
PHGDH-215ENST00000641371 NID2Q14112 1375 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 GPR75-ASB3A0A0A6YYF3 556 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-215ENST00000641371 ORC4O43929 436 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 LARGE1O95461 756 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 SYT1P21579 422 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 PDIA3P30101 505 aaKnown RBP11.41□□□□□ -0.58
PHGDH-215ENST00000641371 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 LARP1BQ659C4 914 aaKnown RBP11.41□□□□□ -0.58
PHGDH-215ENST00000641371 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 UBAC1Q9BSL1 405 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 DCP1AQ9NPI6 582 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-215ENST00000641371 AATFQ9NY61 560 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHGDH-215ENST00000641371 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
PHGDH-215ENST00000641371 CCDC69A6NI79 296 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 WTIPA6NIX2 430 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-215ENST00000641371 CPLX1O14810 134 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 CALM1P0DP23 149 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 CALM2P0DP24 149 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 CALM3P0DP25 149 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 USP5P45974 858 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 MMP14P50281 582 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 APOBRQ0VD83 1088 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 SCRN1Q12765 414 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms