RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
RGPD1-205ENST00000641339 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
RGPD1-205ENST00000641339 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
RGPD1-205ENST00000641339 GAKO14976 1311 aa20.26■□□□□ 0.83
RGPD1-205ENST00000641339 CYP2E1P05181 493 aaPredicted RBP20.25■□□□□ 0.83
RGPD1-205ENST00000641339 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
RGPD1-205ENST00000641339 CCDC102AQ96A19 550 aa20.25■□□□□ 0.83
RGPD1-205ENST00000641339 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
RGPD1-205ENST00000641339 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
RGPD1-205ENST00000641339 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
RGPD1-205ENST00000641339 SLC10A3P09131 477 aa20.24■□□□□ 0.83
RGPD1-205ENST00000641339 HSPA8P11142 646 aaKnown RBP20.24■□□□□ 0.83
RGPD1-205ENST00000641339 ZAP70P43403 619 aa20.24■□□□□ 0.83
RGPD1-205ENST00000641339 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
RGPD1-205ENST00000641339 ARMC9Q7Z3E5 817 aa20.24■□□□□ 0.83
RGPD1-205ENST00000641339 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
RGPD1-205ENST00000641339 DZIP1Q86YF9 867 aaKnown RBP20.24■□□□□ 0.83
RGPD1-205ENST00000641339 TNNI2P48788 182 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 MAP2K1Q02750 393 aaPredicted RBP20.23■□□□□ 0.83
RGPD1-205ENST00000641339 NOGQ13253 232 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 RASAL3Q86YV0 1011 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
RGPD1-205ENST00000641339 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 USP40Q9NVE5 1235 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 ANGEL1Q9UNK9 670 aaKnown RBP20.23■□□□□ 0.83
RGPD1-205ENST00000641339 THSD7BQ9C0I4 1608 aa20.23■□□□□ 0.83
RGPD1-205ENST00000641339 GPR75-ASB3A0A0A6YYF3 556 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 NFIAQ12857 509 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 SLF2Q8IX21 1173 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 FAM198AQ9UFP1 575 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 MROH7-TTC4A0A0A0MT08 1334 aa20.22■□□□□ 0.83
RGPD1-205ENST00000641339 PPP1R12BO60237 982 aaPredicted RBP20.21■□□□□ 0.83
RGPD1-205ENST00000641339 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
RGPD1-205ENST00000641339 RAI14Q9P0K7 980 aa20.21■□□□□ 0.83
RGPD1-205ENST00000641339 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
RGPD1-205ENST00000641339 TSKSQ9UJT2 592 aa20.21■□□□□ 0.83
RGPD1-205ENST00000641339 NDUFB9Q9Y6M9 179 aa20.21■□□□□ 0.83
RGPD1-205ENST00000641339 BTDP43251 543 aa20.2■□□□□ 0.82
RGPD1-205ENST00000641339 RHBDL3P58872 404 aa20.2■□□□□ 0.82
RGPD1-205ENST00000641339 KIF23Q02241 960 aaPredicted RBP20.2■□□□□ 0.82
RGPD1-205ENST00000641339 ZFPM1Q8IX07 1006 aa20.2■□□□□ 0.82
RGPD1-205ENST00000641339 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
RGPD1-205ENST00000641339 IDI2Q9BXS1 227 aa20.2■□□□□ 0.82
RGPD1-205ENST00000641339 AKAP11Q9UKA4 1901 aa20.19■□□□□ 0.82
RGPD1-205ENST00000641339 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
RGPD1-205ENST00000641339 IFIT2P09913 472 aaKnown RBP20.19■□□□□ 0.82
RGPD1-205ENST00000641339 GSTO1P78417 241 aa20.19■□□□□ 0.82
RGPD1-205ENST00000641339 TCP10Q12799 353 aa20.19■□□□□ 0.82
RGPD1-205ENST00000641339 LRRCC1Q9C099 1032 aa20.19■□□□□ 0.82
RGPD1-205ENST00000641339 ANTXR1Q9H6X2 564 aa20.19■□□□□ 0.82
RGPD1-205ENST00000641339 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
RGPD1-205ENST00000641339 WDHD1O75717 1129 aaPredicted RBP20.18■□□□□ 0.82
RGPD1-205ENST00000641339 LDHCP07864 332 aa20.18■□□□□ 0.82
RGPD1-205ENST00000641339 CLMNQ96JQ2 1002 aa20.18■□□□□ 0.82
RGPD1-205ENST00000641339 CSRNP1Q96S65 589 aa20.18■□□□□ 0.82
RGPD1-205ENST00000641339 RFX7Q2KHR2 1363 aa20.18■□□□□ 0.82
RGPD1-205ENST00000641339 IGSF3O75054 1194 aa20.17■□□□□ 0.82
RGPD1-205ENST00000641339 BEGAINQ9BUH8 593 aa20.17■□□□□ 0.82
RGPD1-205ENST00000641339 BCL11AQ9H165 835 aa20.17■□□□□ 0.82
RGPD1-205ENST00000641339 DDX4Q9NQI0 724 aaKnown RBP20.17■□□□□ 0.82
RGPD1-205ENST00000641339 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
RGPD1-205ENST00000641339 IREB2P48200 963 aaKnown RBP20.16■□□□□ 0.82
RGPD1-205ENST00000641339 RGS3P49796 1198 aa20.16■□□□□ 0.82
RGPD1-205ENST00000641339 NAA16Q6N069 864 aaPredicted RBP20.16■□□□□ 0.82
RGPD1-205ENST00000641339 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
RGPD1-205ENST00000641339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.16■□□□□ 0.82
RGPD1-205ENST00000641339 SLC10A4Q96EP9 437 aa20.16■□□□□ 0.82
RGPD1-205ENST00000641339 RPAP1Q9BWH6 1393 aaPredicted RBP20.16■□□□□ 0.82
RGPD1-205ENST00000641339 MYH2Q9UKX2 1941 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 ENTPD3O75355 529 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 SPRYD7Q5W111 196 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.15■□□□□ 0.82
RGPD1-205ENST00000641339 SH3BP5LQ7L8J4 393 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 ANKRD13AQ8IZ07 590 aa20.15■□□□□ 0.82
RGPD1-205ENST00000641339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.15■□□□□ 0.82
RGPD1-205ENST00000641339 ATP5JP18859 108 aa20.14■□□□□ 0.81
RGPD1-205ENST00000641339 PPP4CP60510 307 aa20.14■□□□□ 0.81
RGPD1-205ENST00000641339 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
RGPD1-205ENST00000641339 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
RGPD1-205ENST00000641339 IDH1O75874 414 aaKnown RBP20.13■□□□□ 0.81
RGPD1-205ENST00000641339 MAP4K4O95819 1239 aaPredicted RBP20.13■□□□□ 0.81
RGPD1-205ENST00000641339 GJA5P36382 358 aa20.13■□□□□ 0.81
RGPD1-205ENST00000641339 MAP3K9P80192 1104 aa20.13■□□□□ 0.81
RGPD1-205ENST00000641339 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
RGPD1-205ENST00000641339 ATRNL1Q5VV63 1379 aa20.12■□□□□ 0.81
RGPD1-205ENST00000641339 DDTLA6NHG4 134 aaPredicted RBP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 TM4SF4P48230 202 aa20.12■□□□□ 0.81
RGPD1-205ENST00000641339 REM2Q8IYK8 340 aaPredicted RBP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 SH3RF3Q8TEJ3 882 aaPredicted RBP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 HOOK2Q96ED9 719 aa20.12■□□□□ 0.81
RGPD1-205ENST00000641339 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 WNK4Q96J92 1243 aa20.12■□□□□ 0.81
RGPD1-205ENST00000641339 BOLA2Q9H3K6 86 aa20.12■□□□□ 0.81
RGPD1-205ENST00000641339 AATFQ9NY61 560 aaKnown RBP eCLIP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.12■□□□□ 0.81
RGPD1-205ENST00000641339 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 PICALMQ13492 652 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms