RNA–Protein interactions for RNA: ENST00000641309.1

CASC19-221, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-221ENST00000641309 TMOD3Q9NYL9 352 aa6.92□□□□□ -1.3
CASC19-221ENST00000641309 KIF20BQ96Q89 1820 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 DHX37Q8IY37 1157 aaKnown RBP6.91□□□□□ -1.3
CASC19-221ENST00000641309 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 C1orf216Q8TAB5 229 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 PBXIP1Q96AQ6 731 aa6.91□□□□□ -1.3
CASC19-221ENST00000641309 NSD3Q9BZ95 1437 aa6.9□□□□□ -1.3
CASC19-221ENST00000641309 DPEP1P16444 411 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 PLA2G4AP47712 749 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.31
CASC19-221ENST00000641309 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 TSEN2Q8NCE0 465 aaKnown RBP6.9□□□□□ -1.31
CASC19-221ENST00000641309 ATG3Q9NT62 314 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 SPG7Q9UQ90 795 aa6.9□□□□□ -1.31
CASC19-221ENST00000641309 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 PTCD1O75127 700 aaKnown RBP6.89□□□□□ -1.31
CASC19-221ENST00000641309 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 SSFA2P28290 1259 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 NOS2P35228 1153 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
CASC19-221ENST00000641309 TEAD4Q15561 434 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 EFHC2Q5JST6 749 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 MORC1Q86VD1 984 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 C16orf71Q8IYS4 520 aaPredicted RBP6.89□□□□□ -1.31
CASC19-221ENST00000641309 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 GPAMQ9HCL2 828 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 NOVA2Q9UNW9 492 aaKnown RBP6.89□□□□□ -1.31
CASC19-221ENST00000641309 IQSEC3Q9UPP2 1182 aaPredicted RBP6.89□□□□□ -1.31
CASC19-221ENST00000641309 FLT4P35916 1363 aa6.89□□□□□ -1.31
CASC19-221ENST00000641309 CICQ96RK0 1608 aaPredicted RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 TOMM70O94826 608 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 DKK1O94907 266 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 ATG7O95352 703 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 PHKG2P15735 406 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 MSX1P28360 303 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 RFC4P35249 363 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 EPHA4P54764 986 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 FOXK2Q01167 660 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 LBRQ14739 615 aaKnown RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 CC2D1BQ5T0F9 858 aaKnown RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 TRERF1Q96PN7 1200 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 SRP68Q9UHB9 627 aaKnown RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 RTCBQ9Y3I0 505 aaKnown RBP6.88□□□□□ -1.31
CASC19-221ENST00000641309 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 RTL1A6NKG5 1358 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 ADCY9O60503 1353 aa6.88□□□□□ -1.31
CASC19-221ENST00000641309 PCNTO95613 3336 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 CCDC88AQ3V6T2 1871 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 PPP2R1AP30153 589 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 CHRNA5P30532 468 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 BICDL1Q6ZP65 573 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 DNAJC5GQ8N7S2 189 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 PNISRQ8TF01 805 aaKnown RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 SCG3Q8WXD2 468 aaKnown RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 CFAP53Q96M91 514 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 TSPAN10Q9H1Z9 355 aaPredicted RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 CCDC87Q9NVE4 849 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 GJA3Q9Y6H8 435 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 ANKRD26Q9UPS8 1709 aa6.87□□□□□ -1.31
CASC19-221ENST00000641309 MYH14Q7Z406 1995 aaKnown RBP6.87□□□□□ -1.31
CASC19-221ENST00000641309 GYS1P13807 737 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 CABP4P57796 275 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 TGFB2P61812 414 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 EIF4A2Q14240 407 aaKnown RBP6.86□□□□□ -1.31
CASC19-221ENST00000641309 DBN1Q16643 649 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.31
CASC19-221ENST00000641309 RNF181Q9P0P0 153 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 PHF24Q9UPV7 400 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 PXDNLA1KZ92 1463 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 PKD1L3Q7Z443 1732 aa6.86□□□□□ -1.31
CASC19-221ENST00000641309 WDR90Q96KV7 1748 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 KIAA1551Q9HCM1 1747 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 KCPQ6ZWJ8 1503 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 ERBB4Q15303 1308 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 KCNA3P22001 575 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 HMGB2P26583 209 aaKnown RBP6.85□□□□□ -1.31
CASC19-221ENST00000641309 GMPRP36959 345 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
CASC19-221ENST00000641309 SWI5Q1ZZU3 235 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 ZNF530Q6P9A1 599 aaPredicted RBP6.85□□□□□ -1.31
CASC19-221ENST00000641309 FIGNL1Q6PIW4 674 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
CASC19-221ENST00000641309 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms