RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
PNKP-231ENST00000640501 UBAC1Q9BSL1 405 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 LRRC2Q9BYS8 371 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 TOMM22Q9NS69 142 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
PNKP-231ENST00000640501 ANAPC4Q9UJX5 808 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 MYH15Q9Y2K3 1946 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 SYCE3A1L190 88 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 GSG1L2A8MUP6 293 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 SH2B2O14492 632 aaPredicted RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 IFIT3O14879 490 aaKnown RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 FOXP2O15409 715 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 JAK2O60674 1132 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 BAG3O95817 575 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 CALM1P0DP23 149 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 CALM2P0DP24 149 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 CALM3P0DP25 149 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 ATP2B4P23634 1241 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 CCT2P78371 535 aaKnown RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 CCDC178Q5BJE1 867 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 C15orf52Q6ZUT6 534 aaKnown RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 DZIP1Q86YF9 867 aaKnown RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 DDX11Q96FC9 970 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 ZNF287Q9HBT7 754 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 ATP8A2Q9NTI2 1148 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 ARPP21Q9UBL0 812 aaPredicted RBP9.71□□□□□ -0.86
PNKP-231ENST00000640501 TCHHQ07283 1943 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.86
PNKP-231ENST00000640501 BRWD3Q6RI45 1802 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 GOLGA8AA7E2F4 631 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 CAVIN2O95810 425 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 SERPINB2P05120 415 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 XBP1P17861 261 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
PNKP-231ENST00000640501 PPARAQ07869 468 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 RESTQ13127 1097 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 WTAPQ15007 396 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
PNKP-231ENST00000640501 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 LCORLQ8N3X6 602 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 CRAMP1Q96RY5 1269 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 TMEM63CQ9P1W3 806 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
PNKP-231ENST00000640501 STK36Q9NRP7 1315 aa9.7□□□□□ -0.86
PNKP-231ENST00000640501 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
PNKP-231ENST00000640501 B4E1Z4 1266 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 PLSCR1O15162 318 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 CTAGE5O15320 804 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 KDM4AO75164 1064 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 LDHBP07195 334 aaKnown RBP9.69□□□□□ -0.86
PNKP-231ENST00000640501 LAMB1P07942 1786 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 GYS1P13807 737 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 PLCG2P16885 1265 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 AKAP17AQ02040 695 aaKnown RBP9.69□□□□□ -0.86
PNKP-231ENST00000640501 PDE4BQ07343 736 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
PNKP-231ENST00000640501 NID2Q14112 1375 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 CRY2Q49AN0 593 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 PRR5LQ6MZQ0 368 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 APOA5Q6Q788 366 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 CCDC73Q6ZRK6 1079 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 TBC1D10CQ8IV04 446 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 JMYQ8N9B5 988 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 MIGA1Q8NAN2 632 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 BICD2Q8TD16 824 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 TBC1D22AQ8WUA7 517 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 NUP62CLQ9H1M0 184 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 GDPD2Q9HCC8 539 aa9.69□□□□□ -0.86
PNKP-231ENST00000640501 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
PNKP-231ENST00000640501 TAF1P21675 1872 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 MINDY4BA8MYZ0 360 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 SNAP23O00161 211 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 TRIM37O94972 964 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 CCDC192P0DO97 292 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 TM4SF1P30408 202 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 ALDH1B1P30837 517 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 ANTXR2P58335 489 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 SF3A1Q15459 793 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 MAP3K11Q16584 847 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 TXNRD1Q16881 649 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 RRP12Q5JTH9 1297 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 KCNG4Q8TDN1 519 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 IGDCC4Q8TDY8 1250 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms