RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 A0A1B0GUL6 1792 aa22.62■■□□□ 1.21
VPS72-207ENST00000640458 SZT2Q5T011 3432 aa22.62■■□□□ 1.21
VPS72-207ENST00000640458 CIAO1O76071 339 aa22.61■■□□□ 1.21
VPS72-207ENST00000640458 ATG9AQ7Z3C6 839 aa22.61■■□□□ 1.21
VPS72-207ENST00000640458 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
VPS72-207ENST00000640458 COPRSQ9NQ92 184 aa22.61■■□□□ 1.21
VPS72-207ENST00000640458 RCAN3Q9UKA8 241 aa22.61■■□□□ 1.21
VPS72-207ENST00000640458 TTF2Q9UNY4 1162 aaKnown RBP22.61■■□□□ 1.21
VPS72-207ENST00000640458 TLR2O60603 784 aa22.6■■□□□ 1.21
VPS72-207ENST00000640458 MTFR1Q15390 333 aa22.6■■□□□ 1.21
VPS72-207ENST00000640458 SLC17A8Q8NDX2 589 aa22.6■■□□□ 1.21
VPS72-207ENST00000640458 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.6■■□□□ 1.21
VPS72-207ENST00000640458 ZSWIM8A7E2V4 1837 aa22.59■■□□□ 1.21
VPS72-207ENST00000640458 MFSD14BQ5SR56 506 aa22.59■■□□□ 1.21
VPS72-207ENST00000640458 FAM84BQ96KN1 310 aaPredicted RBP22.59■■□□□ 1.21
VPS72-207ENST00000640458 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.21
VPS72-207ENST00000640458 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 CETPP11597 493 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 MS4A1P11836 297 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
VPS72-207ENST00000640458 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 SHISA4Q96DD7 197 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 SIL1Q9H173 461 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
VPS72-207ENST00000640458 PA2G4Q9UQ80 394 aaKnown RBP22.58■■□□□ 1.21
VPS72-207ENST00000640458 BTBD19C9JJ37 291 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 GNRH1P01148 92 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
VPS72-207ENST00000640458 FGFR2P21802 821 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 IL15P40933 162 aaPredicted RBP22.57■■□□□ 1.2
VPS72-207ENST00000640458 GYG1P46976 350 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 TNNI2P48788 182 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 PUM3Q15397 648 aaKnown RBP22.57■■□□□ 1.2
VPS72-207ENST00000640458 FBXO33Q7Z6M2 555 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 TDRD7Q8NHU6 1098 aaKnown RBP22.57■■□□□ 1.2
VPS72-207ENST00000640458 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
VPS72-207ENST00000640458 SPDYE5A6NIY4 337 aa22.56■■□□□ 1.2
VPS72-207ENST00000640458 PRMT2P55345 433 aa22.56■■□□□ 1.2
VPS72-207ENST00000640458 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
VPS72-207ENST00000640458 CEP126Q9P2H0 1117 aa22.55■■□□□ 1.2
VPS72-207ENST00000640458 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
VPS72-207ENST00000640458 CRKP46108 304 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 SNAPC2Q13487 334 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 CAVIN4Q5BKX8 364 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 ERO1BQ86YB8 467 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 NKX2-3Q8TAU0 364 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 LPIN2Q92539 896 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 HTATIP2Q9BUP3 242 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 ZCCHC17Q9NP64 241 aaKnown RBP22.54■■□□□ 1.2
VPS72-207ENST00000640458 SNCAIPQ9Y6H5 919 aa22.54■■□□□ 1.2
VPS72-207ENST00000640458 PNMA6EA0A0J9YXQ4 647 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 IRF6O14896 467 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 PSMC4P43686 418 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 RAET1EQ8TD07 263 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 ZKSCAN4Q969J2 545 aaPredicted RBP22.53■■□□□ 1.2
VPS72-207ENST00000640458 WRNIP1Q96S55 665 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 SRRDQ9UH36 339 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 CPA4Q9UI42 421 aa22.53■■□□□ 1.2
VPS72-207ENST00000640458 SLC5A1P13866 664 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 CTGFP29279 349 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 GRK4P32298 578 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 ATP8B2P98198 1209 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 BIN2Q9UBW5 565 aaPredicted RBP22.52■■□□□ 1.2
VPS72-207ENST00000640458 NR2E3Q9Y5X4 410 aa22.52■■□□□ 1.2
VPS72-207ENST00000640458 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
VPS72-207ENST00000640458 CCL5P13501 91 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 HOXD10P28358 340 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 BCAMP50895 628 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 CACNB3P54284 484 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 C17orf99Q6UX52 265 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 TRIM47Q96LD4 638 aa22.51■■□□□ 1.19
VPS72-207ENST00000640458 RANBP2P49792 3224 aaKnown RBP22.51■■□□□ 1.19
VPS72-207ENST00000640458 GJB1P08034 283 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 GJA8P48165 433 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 PPIL2Q13356 520 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 POLA2Q14181 598 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 ATP2B3Q16720 1220 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 RNF208Q9H0X6 261 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 PRO3102Q9H379 93 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 C1orf115Q9H7X2 142 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 ARAP2Q8WZ64 1704 aa22.5■■□□□ 1.19
VPS72-207ENST00000640458 OSBPP22059 807 aa22.49■■□□□ 1.19
VPS72-207ENST00000640458 MVPQ14764 893 aaKnown RBP22.49■■□□□ 1.19
VPS72-207ENST00000640458 GRIK5Q16478 980 aa22.49■■□□□ 1.19
VPS72-207ENST00000640458 UBE2Q1Q7Z7E8 422 aa22.49■■□□□ 1.19
VPS72-207ENST00000640458 SSH3Q8TE77 659 aa22.49■■□□□ 1.19
VPS72-207ENST00000640458 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.48■■□□□ 1.19
VPS72-207ENST00000640458 MYPNQ86TC9 1320 aa22.48■■□□□ 1.19
VPS72-207ENST00000640458 G3BP1Q13283 466 aaKnown RBP eCLIP22.47■■□□□ 1.19
VPS72-207ENST00000640458 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
VPS72-207ENST00000640458 DDX19BQ9UMR2 479 aa22.47■■□□□ 1.19
VPS72-207ENST00000640458 IQSEC3Q9UPP2 1182 aaPredicted RBP22.47■■□□□ 1.19
VPS72-207ENST00000640458 COG6Q9Y2V7 657 aa22.47■■□□□ 1.19
VPS72-207ENST00000640458 PDHXO00330 501 aa22.46■■□□□ 1.19
VPS72-207ENST00000640458 FRAT2O75474 233 aaPredicted RBP22.46■■□□□ 1.19
VPS72-207ENST00000640458 FARP2O94887 1054 aaPredicted RBP22.46■■□□□ 1.19
VPS72-207ENST00000640458 UBXN2AP68543 259 aa22.46■■□□□ 1.19
VPS72-207ENST00000640458 TFCP2Q12800 502 aa22.46■■□□□ 1.19
VPS72-207ENST00000640458 CHAF1AQ13111 956 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms