RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 STMN4Q9H169 189 aaPredicted RBP16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 ELP1O95163 1332 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 USP21Q9UK80 565 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 PLBD2Q8NHP8 589 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 TRPM2O94759 1503 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 SYT10Q6XYQ8 523 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC25Q86WR0 208 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 RHOXF2Q9BQY4 288 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 RSPH14Q9UHP6 348 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 MSANTD4Q8NCY6 345 aa16.56■□□□□ 0.24
HNRNPU-226ENST00000640218 EYA2O00167 538 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 TRAF5O00463 557 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 RPL13P26373 211 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 YTHDC2Q9H6S0 1430 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 CHMP2AO43633 222 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 SEC24BO95487 1268 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 KRT5P13647 590 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 SLC27A2O14975 620 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 CCNT1O60563 726 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 PPP1R7Q15435 360 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 KCNA6P17658 529 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 TAF12Q16514 161 aa16.55■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC6Q16204 474 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC114Q96M63 670 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 ZBTB16Q05516 673 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 XAGE2Q96GT9 111 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 NDC80O14777 642 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 TUBB4AP04350 444 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 APBB1IPQ7Z5R6 666 aaPredicted RBP16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 EPB41P11171 864 aaKnown RBP16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 MYL5Q02045 173 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 RAB3IL1Q8TBN0 382 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
HNRNPU-226ENST00000640218 DEXIO95424 95 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 TLDC2A0PJX2 215 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 PDE4DQ08499 809 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 AKR1B15C9JRZ8 316 aaPredicted RBP16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 PLCD1P51178 756 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 BIRC3Q13489 604 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 TESK2Q96S53 571 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 TSGA10Q9BZW7 698 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 TXNDC16Q9P2K2 825 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 FNBP1Q96RU3 617 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
HNRNPU-226ENST00000640218 PDE8AO60658 829 aa16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC122Q5T0U0 273 aa16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 DNAJC21Q5F1R6 531 aaKnown RBP16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 ANKS4BQ8N8V4 417 aa16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 BAG1Q99933 345 aaPredicted RBP16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 VPS16Q9H269 839 aa16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 MNAT1P51948 309 aa16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC169A6NNP5 214 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 FAM160A1Q05DH4 1040 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 RILPL1Q5EBL4 403 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 GPATCH11Q8N954 259 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 MAPK8IP1Q9UQF2 711 aa16.52■□□□□ 0.23
HNRNPU-226ENST00000640218 CLCN1P35523 988 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.232e-7■■□□□ 11.8
HNRNPU-226ENST00000640218 TAF5LO75529 589 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms