RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 COL16A1Q07092 1604 aaPredicted RBP14.34□□□□□ -0.11
SPIN3-236ENST00000640131 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 CTDNEP1O95476 244 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC112Q8NEF3 446 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 NIP7Q9Y221 180 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPIN3-236ENST00000640131 LOC102724428A0A0B4J2F2 783 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 SIK1P57059 783 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 CCDC102BQ68D86 513 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 INTS5Q6P9B9 1019 aaKnown RBP14.33□□□□□ -0.12
SPIN3-236ENST00000640131 PDE8AO60658 829 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 TEX35Q5T0J7 233 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 CWC15Q9P013 229 aaKnown RBP14.33□□□□□ -0.12
SPIN3-236ENST00000640131 SLIT2O94813 1529 aa14.33□□□□□ -0.12
SPIN3-236ENST00000640131 A0A087WWV3 80 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 PDCP20941 246 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
SPIN3-236ENST00000640131 BICD2Q8TD16 824 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 MYH3P11055 1940 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 TAF1P21675 1872 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 PDE8BO95263 885 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 GSCP56915 257 aaPredicted RBP14.32□□□□□ -0.12
SPIN3-236ENST00000640131 UVSSAQ2YD98 709 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
SPIN3-236ENST00000640131 SPATA31A1Q5TZJ5 1347 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
SPIN3-236ENST00000640131 COL14A1Q05707 1796 aaKnown RBP14.32□□□□□ -0.12
SPIN3-236ENST00000640131 IL6STP40189 918 aaPredicted RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 SRLQ86TD4 932 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 PACS2Q86VP3 889 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 CALR3Q96L12 384 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 DACT1Q9NYF0 836 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 LRP6O75581 1613 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 ZSCAN26Q16670 478 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 NOM1Q5C9Z4 860 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 FBXO38Q6PIJ6 1188 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 APPBP2Q92624 585 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 PLA2G12BQ9BX93 195 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 KCNF1Q9H3M0 494 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 KLF18A0A0U1RQI7 1052 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 PRC1O43663 620 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 BCAMP50895 628 aa14.31□□□□□ -0.12
SPIN3-236ENST00000640131 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 BMS1Q14692 1282 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 LEO1Q8WVC0 666 aaPredicted RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 RBM28Q9NW13 759 aaKnown RBP14.31□□□□□ -0.12
SPIN3-236ENST00000640131 RFX7Q2KHR2 1363 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 AKAP11Q9UKA4 1901 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 EIF5P55010 431 aaKnown RBP14.3□□□□□ -0.12
SPIN3-236ENST00000640131 VGLL2Q8N8G2 317 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 ERCC4Q92889 916 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-236ENST00000640131 SENP2Q9HC62 589 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 NWD2Q9ULI1 1742 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-236ENST00000640131 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 GOLGA8BA8MQT2 603 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 BIRC2Q13490 618 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 RALYLQ86SE5 291 aaKnown RBP14.3□□□□□ -0.12
SPIN3-236ENST00000640131 ZNF34Q8IZ26 560 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 MIGA1Q8NAN2 632 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 C16orf45Q96MC5 204 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-236ENST00000640131 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
SPIN3-236ENST00000640131 ZNF213O14771 459 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 PFKFB2O60825 505 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 C3orf67Q6ZVT6 689 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 NBPF11Q86T75 865 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 PPP1R12AO14974 1030 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-236ENST00000640131 NR1I2O75469 434 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 RESTQ13127 1097 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 RASGRF1Q13972 1273 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SPIN3-236ENST00000640131 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
SPIN3-236ENST00000640131 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.29□□□□□ -0.12
SPIN3-236ENST00000640131 V9GYY5 206 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-236ENST00000640131 B4E1Z4 1266 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 PRKAB2O43741 272 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
SPIN3-236ENST00000640131 ANTXR2P58335 489 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 CTDSPL2Q05D32 466 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 RRP12Q5JTH9 1297 aaKnown RBP14.28□□□□□ -0.12
SPIN3-236ENST00000640131 ARMT1Q9H993 441 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 MYH7P12883 1935 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 PDE6AP16499 860 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 ADD2P35612 726 aa14.28□□□□□ -0.12
SPIN3-236ENST00000640131 MAP2K2P36507 400 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms