RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 NEDD4P46934 1319 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 RGPD3A6NKT7 1758 aaPredicted RBP11.7□□□□□ -0.54
ATM-226ENST00000638443 RGPD4Q7Z3J3 1758 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 ZNF213O14771 459 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 ANTXR2P58335 489 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 EXOSC10Q01780 885 aaKnown RBP11.7□□□□□ -0.54
ATM-226ENST00000638443 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
ATM-226ENST00000638443 JAK2O60674 1132 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 EVX2Q03828 476 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 IFNL3Q8IZI9 196 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 SYT1P21579 422 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 MECOMQ03112 1051 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 SCRN1Q12765 414 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 NSUN4Q96CB9 384 aaKnown RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 ZSCAN31Q96LW9 406 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 ALDH8A1Q9H2A2 487 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 NCOA5Q9HCD5 579 aaKnown RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
ATM-226ENST00000638443 LTBP1Q14766 1721 aa11.69□□□□□ -0.54
ATM-226ENST00000638443 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 SRGNP10124 158 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 SLC15A2Q16348 729 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 NAPBQ9H115 298 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 DUOX1Q9NRD9 1551 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 CYP2D7A0A087X1C5 515 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 B4E1Z4 1266 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 PATL2C9JE40 543 aaKnown RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 PRC1O43663 620 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
ATM-226ENST00000638443 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 SENP2Q9HC62 589 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
ATM-226ENST00000638443 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
ATM-226ENST00000638443 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
ATM-226ENST00000638443 TDO2P48775 406 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 GGA1Q9UJY5 639 aa11.67□□□□□ -0.54
ATM-226ENST00000638443 STX6O43752 255 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 RALYLQ86SE5 291 aaKnown RBP11.66□□□□□ -0.54
ATM-226ENST00000638443 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 UTRNP46939 3433 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 MAST2Q6P0Q8 1798 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 TIAM2Q8IVF5 1701 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 CHRNA5P30532 468 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 FOSBP53539 338 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 CDC37L1Q7L3B6 337 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
ATM-226ENST00000638443 TDRD7Q8NHU6 1098 aaKnown RBP11.66□□□□□ -0.54
ATM-226ENST00000638443 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
ATM-226ENST00000638443 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
ATM-226ENST00000638443 BBOX1O75936 387 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 CTDNEP1O95476 244 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 RXRAP19793 462 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
ATM-226ENST00000638443 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 MTMR6Q9Y217 621 aa11.65□□□□□ -0.54
ATM-226ENST00000638443 BAZ2AQ9UIF9 1905 aaKnown RBP11.65□□□□□ -0.54
ATM-226ENST00000638443 MINDY4BA8MYZ0 360 aa11.65□□□□□ -0.55
ATM-226ENST00000638443 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.55
ATM-226ENST00000638443 MCM5P33992 734 aa11.65□□□□□ -0.55
ATM-226ENST00000638443 GSE1Q14687 1217 aa11.65□□□□□ -0.55
ATM-226ENST00000638443 RRP12Q5JTH9 1297 aaKnown RBP11.65□□□□□ -0.55
ATM-226ENST00000638443 FERMT3Q86UX7 667 aa11.65□□□□□ -0.55
ATM-226ENST00000638443 DZIP1Q86YF9 867 aaKnown RBP11.65□□□□□ -0.55
ATM-226ENST00000638443 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.555e-7■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms