RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZPR1O75312 459 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 ADCY5O95622 1261 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 CYP7A1P22680 504 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 TMEM67Q5HYA8 995 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 NFXL1Q6ZNB6 911 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 GJB4Q9NTQ9 266 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 MRVI1Q9Y6F6 885 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 PTMAP06454 111 aaKnown RBP25.11■■□□□ 1.61
CLN6-224ENST00000638076 CAVIN4Q5BKX8 364 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 MFSD6Q6ZSS7 791 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 ADGRA1Q86SQ6 560 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 MICU3Q86XE3 530 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 NBPF5PQ86XG9 351 aaPredicted RBP25.11■■□□□ 1.61
CLN6-224ENST00000638076 CNNM2Q9H8M5 875 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 CCNL1Q9UK58 526 aaPredicted RBP25.11■■□□□ 1.61
CLN6-224ENST00000638076 SGMS1Q86VZ5 419 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 VPS37DQ86XT2 251 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 CCAR1Q8IX12 1150 aaKnown RBP25.11■■□□□ 1.61
CLN6-224ENST00000638076 RAI14Q9P0K7 980 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 ZKSCAN5Q9Y2L8 839 aa25.11■■□□□ 1.61
CLN6-224ENST00000638076 BTAF1O14981 1849 aa25.1■■□□□ 1.61
CLN6-224ENST00000638076 CASZ1Q86V15 1759 aa25.1■■□□□ 1.61
CLN6-224ENST00000638076 CDC27P30260 824 aa25.1■■□□□ 1.61
CLN6-224ENST00000638076 KRT23Q9C075 422 aa25.1■■□□□ 1.61
CLN6-224ENST00000638076 A0A1B0GUL6 1792 aa25.1■■□□□ 1.61
CLN6-224ENST00000638076 ZBTB43O43298 467 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 POLR3DP05423 398 aaPredicted RBP25.09■■□□□ 1.61
CLN6-224ENST00000638076 CCDC144CPQ8IYA2 1237 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 FAM200AQ8TCP9 573 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 NLRP3Q96P20 1036 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 COL1A1P02452 1464 aaPredicted RBP25.09■■□□□ 1.61
CLN6-224ENST00000638076 IFIT3O14879 490 aaKnown RBP25.09■■□□□ 1.61
CLN6-224ENST00000638076 CDKL5O76039 1030 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 ME1P48163 572 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 STAG1Q8WVM7 1258 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 RTEL1Q9NZ71 1219 aa25.09■■□□□ 1.61
CLN6-224ENST00000638076 RTCBQ9Y3I0 505 aaKnown RBP25.09■■□□□ 1.61
CLN6-224ENST00000638076 LIFRP42702 1097 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 PLCB2Q00722 1185 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 FAM84BQ96KN1 310 aaPredicted RBP25.08■■□□□ 1.61
CLN6-224ENST00000638076 GOLPH3LQ9H4A5 285 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 RPS8P62241 208 aaKnown RBP25.08■■□□□ 1.61
CLN6-224ENST00000638076 RRP12Q5JTH9 1297 aaKnown RBP25.08■■□□□ 1.61
CLN6-224ENST00000638076 CPLX2Q6PUV4 134 aaKnown RBP25.08■■□□□ 1.61
CLN6-224ENST00000638076 TIAM2Q8IVF5 1701 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 MYL10Q9BUA6 226 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 TOMM22Q9NS69 142 aa25.08■■□□□ 1.61
CLN6-224ENST00000638076 BRAPQ7Z569 592 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 AMIGO3Q86WK7 504 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 CCDC24Q8N4L8 307 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 AIFM3Q96NN9 605 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 ANO8Q9HCE9 1232 aaPredicted RBP25.07■■□□□ 1.6
CLN6-224ENST00000638076 GOLGA8AA7E2F4 631 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 ANO6Q4KMQ2 910 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 STK11IPQ8N1F8 1099 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 PHKBQ93100 1093 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 ALG1Q9BT22 464 aa25.07■■□□□ 1.6
CLN6-224ENST00000638076 CHD4Q14839 1912 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 MAGEB6P1A0A0J9YX57 407 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 KIF28PB7ZC32 967 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 CCDC73Q6ZRK6 1079 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 SDR42E1Q8WUS8 393 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 SLC12A7Q9Y666 1083 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 CLIC4Q9Y696 253 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 THSD7AQ9UPZ6 1657 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 CCDC69A6NI79 296 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 KIF23Q02241 960 aaPredicted RBP25.06■■□□□ 1.6
CLN6-224ENST00000638076 SNW1Q13573 536 aaKnown RBP25.06■■□□□ 1.6
CLN6-224ENST00000638076 MYSM1Q5VVJ2 828 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 SASS6Q6UVJ0 657 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 TPTE2Q6XPS3 522 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 ARHGEF1Q92888 912 aaKnown RBP25.06■■□□□ 1.6
CLN6-224ENST00000638076 PCDHA7Q9UN72 937 aa25.06■■□□□ 1.6
CLN6-224ENST00000638076 NHSQ6T4R5 1651 aa25.05■■□□□ 1.6
CLN6-224ENST00000638076 AP5Z1O43299 807 aa25.05■■□□□ 1.6
CLN6-224ENST00000638076 NTRK3Q16288 839 aa25.05■■□□□ 1.6
CLN6-224ENST00000638076 LINC00301Q8NCQ3 95 aa25.05■■□□□ 1.6
CLN6-224ENST00000638076 FAM217BQ9NTX9 383 aaPredicted RBP25.05■■□□□ 1.6
CLN6-224ENST00000638076 PPARAQ07869 468 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 RGS22Q8NE09 1264 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 ZKSCAN3Q9BRR0 538 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 SPATA31A6Q5VVP1 1343 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 KLRK1P26718 216 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 FSIP1Q8NA03 581 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 POLR3EQ9NVU0 708 aa25.04■■□□□ 1.6
CLN6-224ENST00000638076 ZNF500O60304 480 aaPredicted RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 FAM160A1Q05DH4 1040 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 STK38Q15208 465 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 FBXO33Q7Z6M2 555 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 LUZP1Q86V48 1076 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 ENGASEQ8NFI3 743 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 RIOK1Q9BRS2 568 aaKnown RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 COL24A1Q17RW2 1714 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 RANBP6O60518 1105 aaKnown RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 IARSP41252 1262 aaKnown RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 SART3Q15020 963 aaKnown RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 ADALQ6DHV7 355 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 MPNDQ8N594 471 aa25.03■■□□□ 1.6
CLN6-224ENST00000638076 RNF41Q9H4P4 317 aaPredicted RBP25.03■■□□□ 1.6
CLN6-224ENST00000638076 SYNE3Q6ZMZ3 975 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms