RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 FGFR2P21802 821 aa10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 PTGER2P43116 358 aa10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 GMPSP49915 693 aaPredicted RBP10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 FEZ1Q99689 392 aa10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 UPF3BQ9BZI7 483 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 TDRD3Q9H7E2 651 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-254ENST00000637952 CACNB3P54284 484 aa10.15□□□□□ -0.79
CACNA1A-254ENST00000637952 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.79
CACNA1A-254ENST00000637952 RSBN1LQ6PCB5 846 aaPredicted RBP10.15□□□□□ -0.79
CACNA1A-254ENST00000637952 STX8Q9UNK0 236 aa10.15□□□□□ -0.79
CACNA1A-254ENST00000637952 A0A0D9SFI3 127 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 DDNO94850 711 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 ARID4AP29374 1257 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 CWC22Q9HCG8 908 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 USP17L21D6R901 530 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 CASTP20810 708 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 ADD2P35612 726 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 KCNQ5Q9NR82 932 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 C5P01031 1676 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 IQCA1LA6NCM1 817 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
CACNA1A-254ENST00000637952 KLRG2A4D1S0 409 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 PRDM10Q9NQV6 1147 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 IFIT3O14879 490 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 PRDM1O75626 825 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 SLC51AQ86UW1 340 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 CCAR1Q8IX12 1150 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 CICQ96RK0 1608 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 SGSM2O43147 1006 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 PUS7LQ9H0K6 701 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 GPBP1L1Q9HC44 474 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-254ENST00000637952 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 STK3Q13188 491 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 TICAM2Q86XR7 235 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 OSBP2Q969R2 916 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 RAD50Q92878 1312 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 VGLL2Q8N8G2 317 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 ESR2Q92731 530 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 PRKAB2O43741 272 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 KIF4BQ2VIQ3 1234 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 ZMYM1Q5SVZ6 1142 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 FAM43AQ8N2R8 423 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 LCORLQ8N3X6 602 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 PDRG1Q9NUG6 133 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 HACL1Q9UJ83 578 aa10.12□□□□□ -0.79
CACNA1A-254ENST00000637952 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 PPP1R12BO60237 982 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 IFNL3Q8IZI9 196 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 HOOK2Q96ED9 719 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 TCEANC2Q96MN5 208 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 PALD1Q9ULE6 856 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 SCAF8Q9UPN6 1271 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 RABEP1Q15276 862 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 AGBL3Q8NEM8 1001 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 SUGT1Q9Y2Z0 365 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 KIF3AQ9Y496 699 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 ZNF609O15014 1411 aa10.11□□□□□ -0.79
CACNA1A-254ENST00000637952 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 LRRC2Q9BYS8 371 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 KRT23Q9C075 422 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 HSPD1P10809 573 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 IL1R1P14778 569 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 TMEM67Q5HYA8 995 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 SH3RF3Q8TEJ3 882 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 ZNF512BQ96KM6 892 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 M0R2C6 588 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 NFKBIEO00221 500 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 FGAP02671 866 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 HMGB1P09429 215 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CDK11BP21127 795 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 RPS12P25398 132 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CCDC96Q2M329 555 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CREB3L3Q68CJ9 461 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 MIGA2Q7L4E1 593 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 ATP8A2Q9NTI2 1148 aa10.1□□□□□ -0.79
CACNA1A-254ENST00000637952 CHGBP05060 677 aa10.09□□□□□ -0.79
CACNA1A-254ENST00000637952 FOSBP53539 338 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms