RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 LY75O60449 1722 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 CPLX1O14810 134 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 PRDM1O75626 825 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 PRDX5P30044 214 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 CDC27P30260 824 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 CCDC183Q5T5S1 534 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
SCN8A-214ENST00000637709 SYAP1Q96A49 352 aaPredicted RBP18■□□□□ 0.47
SCN8A-214ENST00000637709 TSPY26PQ9H489 355 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
SCN8A-214ENST00000637709 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
SCN8A-214ENST00000637709 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
SCN8A-214ENST00000637709 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
SCN8A-214ENST00000637709 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
SCN8A-214ENST00000637709 CHMP4CQ96CF2 233 aa17.99■□□□□ 0.47
SCN8A-214ENST00000637709 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
SCN8A-214ENST00000637709 ANGEL1Q9UNK9 670 aaKnown RBP17.99■□□□□ 0.47
SCN8A-214ENST00000637709 ZNF804BA4D1E1 1349 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 GOLGA6L4A6NEF3 574 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 UBE4AQ14139 1066 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 BICD2Q8TD16 824 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 USP28Q96RU2 1077 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 LLPHQ9BRT6 129 aaKnown RBP17.98■□□□□ 0.47
SCN8A-214ENST00000637709 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.47
SCN8A-214ENST00000637709 DACT1Q9NYF0 836 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 MYH2Q9UKX2 1941 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
SCN8A-214ENST00000637709 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
SCN8A-214ENST00000637709 SH2B2O14492 632 aaPredicted RBP17.97■□□□□ 0.47
SCN8A-214ENST00000637709 IFIT3O14879 490 aaKnown RBP17.97■□□□□ 0.47
SCN8A-214ENST00000637709 TRIM44Q96DX7 344 aaPredicted RBP17.97■□□□□ 0.47
SCN8A-214ENST00000637709 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
SCN8A-214ENST00000637709 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
SCN8A-214ENST00000637709 NR1I2O75469 434 aa17.97■□□□□ 0.47
SCN8A-214ENST00000637709 METAP2P50579 478 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCN8A-214ENST00000637709 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
SCN8A-214ENST00000637709 IGDCC4Q8TDY8 1250 aa17.97■□□□□ 0.47
SCN8A-214ENST00000637709 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 MYH15Q9Y2K3 1946 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 APOA5Q6Q788 366 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 LY9Q9HBG7 655 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 A0A087WWV3 80 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 PLCB2Q00722 1185 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 MECOMQ03112 1051 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 AKNAD1Q5T1N1 836 aa17.96■□□□□ 0.47
SCN8A-214ENST00000637709 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
SCN8A-214ENST00000637709 KIF28PB7ZC32 967 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 HIBADHP31937 336 aaKnown RBP17.95■□□□□ 0.46
SCN8A-214ENST00000637709 GRIK5Q16478 980 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 ERCC4Q92889 916 aaPredicted RBP17.95■□□□□ 0.46
SCN8A-214ENST00000637709 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 EVCP57679 992 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
SCN8A-214ENST00000637709 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
SCN8A-214ENST00000637709 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
SCN8A-214ENST00000637709 GYS1P13807 737 aa17.94■□□□□ 0.46
SCN8A-214ENST00000637709 PPARAQ07869 468 aa17.94■□□□□ 0.46
SCN8A-214ENST00000637709 FBXO33Q7Z6M2 555 aa17.94■□□□□ 0.46
SCN8A-214ENST00000637709 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
SCN8A-214ENST00000637709 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
SCN8A-214ENST00000637709 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
SCN8A-214ENST00000637709 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
SCN8A-214ENST00000637709 KRT27Q7Z3Y8 459 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 GOLGA8AA7E2F4 631 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 ZBTB43O43298 467 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 CYP2D6P10635 497 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 CCDC173Q0VFZ6 552 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 PROM2Q8N271 834 aa17.93■□□□□ 0.46
SCN8A-214ENST00000637709 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
SCN8A-214ENST00000637709 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 OLFM4Q6UX06 510 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
SCN8A-214ENST00000637709 FAM217BQ9NTX9 383 aaPredicted RBP17.92■□□□□ 0.46
SCN8A-214ENST00000637709 USP25Q9UHP3 1055 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 SLC12A7Q9Y666 1083 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 NMT2O60551 498 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 FBXW7Q969H0 707 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 GOLPH3LQ9H4A5 285 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 ZMYM6O95789 1325 aa17.92■□□□□ 0.46
SCN8A-214ENST00000637709 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 SERPINB2P05120 415 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 ALX1Q15699 326 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms