RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 OLFM4Q6UX06 510 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 BAG1Q99933 345 aaPredicted RBP23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 MYL10Q9BUA6 226 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 C5P01031 1676 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 CBFA2T2O43439 604 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 KRT40Q6A162 431 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 EYA2O00167 538 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 IL15P40933 162 aaPredicted RBP23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 MTF1Q14872 753 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 CNNM3Q8NE01 707 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 NCOA7Q8NI08 942 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
CACNA1A-243ENST00000637616 ZSCAN12O43309 604 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 PPP2R3AQ06190 1150 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 SMC1AQ14683 1233 aaKnown RBP23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 MICU3Q86XE3 530 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 PARD6BQ9BYG5 372 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 ZNF213O14771 459 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 CCDC158Q5M9N0 1113 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 INCENPQ9NQS7 918 aa23.23■■□□□ 1.31
CACNA1A-243ENST00000637616 TUBB4AP04350 444 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 TTC39AQ5SRH9 613 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 DHX58Q96C10 678 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 HPSEQ9Y251 543 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 A0A0U1RQJ8 604 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 H7C1W4 665 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 ZAP70P43403 619 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 PTPAQ15257 358 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 KRBA2Q6ZNG9 492 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 GRAMD1CQ8IYS0 662 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 ATRIPQ8WXE1 791 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 NBPF26B4DH59 902 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 ARHGAP6O43182 974 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 NBPF14Q5TI25 921 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 NBPF10Q6P3W6 841 aaKnown RBP23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 NBPF15Q8N660 670 aa23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 SRRTQ9BXP5 876 aaKnown RBP23.22■■□□□ 1.31
CACNA1A-243ENST00000637616 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 GRIN1Q05586 938 aa23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 FMR1Q06787 632 aaKnown RBP eCLIP23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 MAP3K9P80192 1104 aa23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 RAD51AP2Q09MP3 1159 aa23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 KCNH3Q9ULD8 1083 aa23.21■■□□□ 1.31
CACNA1A-243ENST00000637616 CYB5R4Q7L1T6 521 aa23.2■■□□□ 1.3
CACNA1A-243ENST00000637616 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
CACNA1A-243ENST00000637616 METAP2P50579 478 aaKnown RBP eCLIP23.2■■□□□ 1.3
CACNA1A-243ENST00000637616 CCDC102BQ68D86 513 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 TC2NQ8N9U0 490 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 XAGE2Q96GT9 111 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 LZTFL1Q9NQ48 299 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 TULP2O00295 520 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 GPAA1O43292 621 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 APPP05067 770 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 PRR29P0C7W0 189 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 MAP3K14Q99558 947 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 NFE2L3Q9Y4A8 694 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 MRFAP1Q9Y605 127 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 A1BGP04217 495 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 CSB-PGBD3P0DP91 1061 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 CPLX3Q8WVH0 158 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 NBPF3Q9H094 633 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 ARFGAP3Q9NP61 516 aa23.19■■□□□ 1.3
CACNA1A-243ENST00000637616 TFRCP02786 760 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 ATP2B1P20020 1258 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 RESP18Q5W5W9 173 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 FBXL16Q8N461 479 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 CCDC12Q8WUD4 166 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 MRPL44Q9H9J2 332 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 PUF60Q9UHX1 559 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 CYP27B1O15528 508 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 DHX8Q14562 1220 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 MPHOSPH8Q99549 860 aa23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 SAMSN1Q9NSI8 373 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-243ENST00000637616 TBC1D10CQ8IV04 446 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 CCDC82Q8N4S0 544 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 GPR161Q8N6U8 529 aaKnown RBP23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 KIFC2Q96AC6 838 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 UBXN6Q9BZV1 441 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 B4E1Z4 1266 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 CABP4P57796 275 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 FUT8Q9BYC5 575 aa23.17■■□□□ 1.3
CACNA1A-243ENST00000637616 AFDNP55196 1824 aaKnown RBP23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 SOWAHDA6NJG2 315 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 FAM193AP78312 1265 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 JMYQ8N9B5 988 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 TRIM34Q9BYJ4 488 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 GPR108Q9NPR9 543 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 H3BQF6 201 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 PPP6R2O75170 966 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 TBX2Q13207 712 aaPredicted RBP23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 RSRC2Q7L4I2 434 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms