RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-222	ENST00000637226	LCE4A	Q5TA78	99 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	SPOCD1	Q6ZMY3	1216 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	WFDC3	Q8IUB2	231 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	CCNJL	Q8IV13	435 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	PLD6	Q8N2A8	252 aa	Known RBP	3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	FAM84A	Q96KN4	292 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	PIDD1	Q9HB75	910 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226	VAV3	Q9UKW4	847 aa		3.37	□□□□□ -1.87
GABRB3-222	ENST00000637226		A0A1W2PP55	124 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	ECEL1	O95672	775 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	SLFN14	P0C7P3	912 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	PRKCQ	Q04759	706 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	CDK5R2	Q13319	367 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	AOC3	Q16853	763 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	KRTAP19-4	Q3LI73	84 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	FAM181A	Q8N9Y4	354 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	TCF12	Q99081	682 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	TRIM56	Q9BRZ2	755 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	WDR18	Q9BV38	432 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	MBNL3	Q9NUK0	354 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	PPP1R9A	Q9ULJ8	1098 aa		3.36	□□□□□ -1.87
GABRB3-222	ENST00000637226	LRRC10B	A6NIK2	292 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	FZD6	O60353	706 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	RNGTT	O60942	597 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	B3GALT4	O96024	378 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	NPR3	P17342	541 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	LIG1	P18858	919 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	CD96	P40200	585 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	IFI16	Q16666	785 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	GALNT12	Q8IXK2	581 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	SMYD4	Q8IYR2	804 aa	Predicted RBP	3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	LRRN4CL	Q8ND94	238 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	HRASLS5	Q96KN8	279 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	ATXN3L	Q9H3M9	355 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	FAM53C	Q9NYF3	392 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	ADAMTS6	Q9UKP5	1117 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	MTMR7	Q9Y216	660 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	SYNGAP1	Q96PV0	1343 aa		3.35	□□□□□ -1.87
GABRB3-222	ENST00000637226	TMEM265	A0A087WTH1	108 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	TMPRSS2	O15393	492 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	NEFL	P07196	543 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	HNRNPU	Q00839	825 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	FKBP4	Q02790	459 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	AP3B2	Q13367	1082 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	ANGEL2	Q5VTE6	544 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	GJD3	Q8N144	294 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	CCDC97	Q96F63	343 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	TOX2	Q96NM4	488 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	FANCD2OS	Q96PS1	177 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	ZC3H12C	Q9C0D7	883 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	EHD4	Q9H223	541 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	ZNF576	Q9H609	170 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	MKNK2	Q9HBH9	465 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	CCDC87	Q9NVE4	849 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	CRIM1	Q9NZV1	1036 aa		3.34	□□□□□ -1.87
GABRB3-222	ENST00000637226	CEACAM5	P06731	702 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	SSFA2	P28290	1259 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	RAP1GAP	P47736	663 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	ID3	Q02535	119 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	MESP2	Q0VG99	397 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	SF3B2	Q13435	895 aa	Known RBP	3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	KCNMB1	Q16558	191 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	MLANA	Q16655	118 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	KIAA0319	Q5VV43	1072 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	SLC23A3	Q6PIS1	610 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	ZSWIM9	Q86XI8	627 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	WDR89	Q96FK6	387 aa	Predicted RBP	3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	SSU72	Q9NP77	194 aa	Known RBP	3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	PCOLCE2	Q9UKZ9	415 aa		3.33	□□□□□ -1.88
GABRB3-222	ENST00000637226	LEFTY1	O75610	366 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	ABL1	P00519	1130 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	ZNF865	P0CJ78	1059 aa	Predicted RBP	3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	HCLS1	P14317	486 aa	Predicted RBP	3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	ITIH2	P19823	946 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	ITPKA	P23677	461 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	ZNF157	P51786	506 aa	Predicted RBP	3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	OXCT1	P55809	520 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	PTPN12	Q05209	780 aa	Known RBP	3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	TTLL4	Q14679	1199 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	FLAD1	Q8NFF5	587 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	PPP1R16B	Q96T49	567 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	DUSP23	Q9BVJ7	150 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	CCDC86	Q9H6F5	360 aa	Known RBP	3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	DISC1	Q9NRI5	854 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	SERPINA10	Q9UK55	444 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	PLAGL2	Q9UPG8	496 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	SNX11	Q9Y5W9	270 aa		3.32	□□□□□ -1.88
GABRB3-222	ENST00000637226	CFP	P27918	469 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	ZP2	Q05996	745 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	IKZF1	Q13422	519 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	KIF4B	Q2VIQ3	1234 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	USPL1	Q5W0Q7	1092 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	ANKLE2	Q86XL3	938 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	TOP6BL	Q8N6T0	577 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	ASB11	Q8WXH4	323 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	KRTAP4-11	Q9BYQ6	195 aa		3.31	□□□□□ -1.88
GABRB3-222	ENST00000637226	NPHS2	Q9NP85	383 aa		3.31	□□□□□ -1.88

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