RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 F8W031 263 aaPredicted RBP25.08■■□□□ 1.61
CLN8-213ENST00000637156 IL27Q8NEV9 243 aa25.08■■□□□ 1.61
CLN8-213ENST00000637156 NACAP1Q9BZK3 213 aa25.08■■□□□ 1.61
CLN8-213ENST00000637156 FHDC1Q9C0D6 1143 aaPredicted RBP25.08■■□□□ 1.61
CLN8-213ENST00000637156 NAPBQ9H115 298 aa25.08■■□□□ 1.61
CLN8-213ENST00000637156 GPR75-ASB3A0A0A6YYF3 556 aa25.07■■□□□ 1.6
CLN8-213ENST00000637156 K7ELQ4 463 aaPredicted RBP25.07■■□□□ 1.6
CLN8-213ENST00000637156 FKBP1AP62942 108 aaKnown RBP25.07■■□□□ 1.6
CLN8-213ENST00000637156 NBPF3Q9H094 633 aa25.07■■□□□ 1.6
CLN8-213ENST00000637156 TTF2Q9UNY4 1162 aaKnown RBP25.07■■□□□ 1.6
CLN8-213ENST00000637156 BRCA1P38398 1863 aaKnown RBP25.07■■□□□ 1.6
CLN8-213ENST00000637156 ZMYM6O95789 1325 aa25.07■■□□□ 1.6
CLN8-213ENST00000637156 NFKBIEO00221 500 aa25.06■■□□□ 1.6
CLN8-213ENST00000637156 TAOK3Q9H2K8 898 aa25.06■■□□□ 1.6
CLN8-213ENST00000637156 BAG3O95817 575 aa25.06■■□□□ 1.6
CLN8-213ENST00000637156 IARSP41252 1262 aaKnown RBP25.06■■□□□ 1.6
CLN8-213ENST00000637156 BLOC1S2Q6QNY1 142 aa25.06■■□□□ 1.6
CLN8-213ENST00000637156 GAKO14976 1311 aa25.05■■□□□ 1.6
CLN8-213ENST00000637156 SLF2Q8IX21 1173 aa25.05■■□□□ 1.6
CLN8-213ENST00000637156 PDRG1Q9NUG6 133 aa25.05■■□□□ 1.6
CLN8-213ENST00000637156 CCDC88AQ3V6T2 1871 aa25.05■■□□□ 1.6
CLN8-213ENST00000637156 RPS6KB1P23443 525 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 TDO2P48775 406 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 SH3RF3Q8TEJ3 882 aaPredicted RBP25.04■■□□□ 1.6
CLN8-213ENST00000637156 CRNKL1Q9BZJ0 848 aaKnown RBP25.04■■□□□ 1.6
CLN8-213ENST00000637156 COL4A5P29400 1685 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 SCN9AQ15858 1988 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 BTDP43251 543 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 AK2P54819 239 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 GIMAP6Q6P9H5 292 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 TCEANC2Q96MN5 208 aa25.04■■□□□ 1.6
CLN8-213ENST00000637156 DCP1AQ9NPI6 582 aaPredicted RBP25.04■■□□□ 1.6
CLN8-213ENST00000637156 MCM2P49736 904 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 SCNN1DP51172 638 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 KIAA0825Q8IV33 1275 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 SPRYD3Q8NCJ5 442 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 ATP8A2Q9NTI2 1148 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 DAGLAQ9Y4D2 1042 aa25.03■■□□□ 1.6
CLN8-213ENST00000637156 TBC1D10CQ8IV04 446 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 LARP6Q9BRS8 491 aaKnown RBP25.02■■□□□ 1.6
CLN8-213ENST00000637156 INCENPQ9NQS7 918 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 MKRN1Q9UHC7 482 aaKnown RBP25.02■■□□□ 1.6
CLN8-213ENST00000637156 ZNRF3Q9ULT6 936 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 RAD17O75943 681 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 RHBDL3P58872 404 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 NOL10Q9BSC4 688 aaKnown RBP25.02■■□□□ 1.6
CLN8-213ENST00000637156 SYT17Q9BSW7 474 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 MRIQ9BWK5 157 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 TACC3Q9Y6A5 838 aa25.02■■□□□ 1.6
CLN8-213ENST00000637156 HMGB1P09429 215 aaKnown RBP25.01■■□□□ 1.59
CLN8-213ENST00000637156 EXOSC10Q01780 885 aaKnown RBP25.01■■□□□ 1.59
CLN8-213ENST00000637156 CTDSPL2Q05D32 466 aa25.01■■□□□ 1.59
CLN8-213ENST00000637156 CTR9Q6PD62 1173 aa25.01■■□□□ 1.59
CLN8-213ENST00000637156 HHIPL2Q6UWX4 724 aa25.01■■□□□ 1.59
CLN8-213ENST00000637156 NOL8Q76FK4 1167 aaKnown RBP25.01■■□□□ 1.59
CLN8-213ENST00000637156 DHX32Q7L7V1 743 aaKnown RBP25.01■■□□□ 1.59
CLN8-213ENST00000637156 ALDH8A1Q9H2A2 487 aaPredicted RBP25.01■■□□□ 1.59
CLN8-213ENST00000637156 MAST2Q6P0Q8 1798 aa25.01■■□□□ 1.59
CLN8-213ENST00000637156 SMIM22K7EJ46 135 aa25■■□□□ 1.59
CLN8-213ENST00000637156 VIL1P09327 827 aaKnown RBP25■■□□□ 1.59
CLN8-213ENST00000637156 NIM1KQ8IY84 436 aa25■■□□□ 1.59
CLN8-213ENST00000637156 TMX3Q96JJ7 454 aa25■■□□□ 1.59
CLN8-213ENST00000637156 USP17L12C9JPN9 530 aa25■■□□□ 1.59
CLN8-213ENST00000637156 USP17L21D6R901 530 aa25■■□□□ 1.59
CLN8-213ENST00000637156 PRELPP51888 382 aa25■■□□□ 1.59
CLN8-213ENST00000637156 NKX2-3Q8TAU0 364 aa25■■□□□ 1.59
CLN8-213ENST00000637156 MINDY4BA8MYZ0 360 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 PSMD14O00487 310 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 PPARAQ07869 468 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 CERS3Q8IU89 383 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 TGFBRAP1Q8WUH2 860 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 MYH2Q9UKX2 1941 aa24.99■■□□□ 1.59
CLN8-213ENST00000637156 FER1L6Q2WGJ9 1857 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 CYP2D7A0A087X1C5 515 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 APOBEC3HQ6NTF7 200 aaKnown RBP24.98■■□□□ 1.59
CLN8-213ENST00000637156 NCOA7Q8NI08 942 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 TEKT1Q969V4 418 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 ANAPC4Q9UJX5 808 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 LTBP3Q9NS15 1303 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 PLCG2P16885 1265 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 USP5P45974 858 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 CRKP46108 304 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 RASSF7Q02833 373 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 TOB2Q14106 344 aaPredicted RBP24.98■■□□□ 1.59
CLN8-213ENST00000637156 RSBN1LQ6PCB5 846 aaPredicted RBP24.98■■□□□ 1.59
CLN8-213ENST00000637156 CHST3Q7LGC8 479 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 JDP2Q8WYK2 163 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 LIMCH1Q9UPQ0 1083 aa24.98■■□□□ 1.59
CLN8-213ENST00000637156 HDLBPQ00341 1268 aaKnown RBP24.97■■□□□ 1.59
CLN8-213ENST00000637156 CXCL9Q07325 125 aa24.97■■□□□ 1.59
CLN8-213ENST00000637156 AKNAD1Q5T1N1 836 aa24.97■■□□□ 1.59
CLN8-213ENST00000637156 MB21D2Q8IYB1 491 aaPredicted RBP24.97■■□□□ 1.59
CLN8-213ENST00000637156 LRRC2Q9BYS8 371 aa24.97■■□□□ 1.59
CLN8-213ENST00000637156 PCDHAC2Q9Y5I4 1007 aa24.97■■□□□ 1.59
CLN8-213ENST00000637156 EVX2Q03828 476 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 Q6ZUG5 572 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 ZDHHC15Q96MV8 337 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 GMLQ99445 158 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 USP17L8P0C7I0 530 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 SBK1Q52WX2 424 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms