RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 PPP1R12BO60237 982 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 ZBTB48P10074 688 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 KLRK1P26718 216 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 NEXNQ0ZGT2 675 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 MCM6Q14566 821 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 MPHOSPH8Q99549 860 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 NEURL1BA8MQ27 555 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 APAF1O14727 1248 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 ITGA6P23229 1130 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 PTPREP23469 700 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 SUPT20HL1Q3ZLR7 823 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 PTPN22Q9Y2R2 807 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
CACNA1A-236ENST00000637117 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 KCNJ4P48050 445 aa11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 CD99L2Q8TCZ2 262 aa11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 TBC1D2Q9BYX2 928 aa11.74□□□□□ -0.53
CACNA1A-236ENST00000637117 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 MYO1BO43795 1136 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 USP2O75604 605 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CSF1RP07333 972 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CHRNDQ07001 517 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CRHR2Q13324 411 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 PLA2G12BQ9BX93 195 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 EFCC1Q9HA90 598 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
CACNA1A-236ENST00000637117 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 F8W031 263 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 SNAP23O00161 211 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 GJA5P36382 358 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 SP3Q02447 781 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 GCKRQ14397 625 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 DIXDC1Q155Q3 683 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 CLUAP1Q96AJ1 413 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 ARMC5Q96C12 935 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 PTPN18Q99952 460 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 MYH3P11055 1940 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
CACNA1A-236ENST00000637117 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 TAF5LO75529 589 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 C15orf52Q6ZUT6 534 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 G2E3Q7L622 706 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 VEZTQ9HBM0 779 aa11.71□□□□□ -0.53
CACNA1A-236ENST00000637117 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 IRS2Q9Y4H2 1338 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 SNPHO15079 494 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 IL1R1P14778 569 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 CASP7P55210 303 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 FKBP1AP62942 108 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 CAP1Q01518 475 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 RASA3Q14644 834 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 SSC5DA1L4H1 1573 aa11.7□□□□□ -0.54
CACNA1A-236ENST00000637117 A6NJR5 290 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 DNAJB2P25686 324 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 FXR1P51114 621 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 ZNF804AQ7Z570 1209 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 MYH16Q9H6N6 1097 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
CACNA1A-236ENST00000637117 AOX1Q06278 1338 aa11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 CD46P15529 392 aa11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 IFIT5Q13325 482 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms