RNA–Protein interactions for RNA: ENST00000636858.1

KCNQ2-231, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-231	ENST00000636858	CNNM1	Q9NRU3	951 aa		6.21	□□□□□ -1.42
KCNQ2-231	ENST00000636858	DIAPH3	Q9NSV4	1193 aa		6.21	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CEP126	Q9P2H0	1117 aa		6.21	□□□□□ -1.42
KCNQ2-231	ENST00000636858	BRCA1	P38398	1863 aa	Known RBP	6.21	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RAD50	Q92878	1312 aa		6.21	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SLX4	Q8IY92	1834 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	MED23	Q9ULK4	1368 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TIAM2	Q8IVF5	1701 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SPDYE16	A6NNV3	312 aa	Predicted RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	WNT7A	O00755	349 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SGSM2	O43147	1006 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ATP5J	P18859	108 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	DNAJB2	P25686	324 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TXNRD1	Q16881	649 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	LDHAL6A	Q6ZMR3	332 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NBPF5P	Q86XG9	351 aa	Predicted RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	HSCB	Q8IWL3	235 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NPAS3	Q8IXF0	933 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	FBXO41	Q8TF61	875 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ARHGEF1	Q92888	912 aa	Known RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	EDC3	Q96F86	508 aa	Known RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SETDB2	Q96T68	719 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	DNAJC2	Q99543	621 aa	Known RBP	6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	HAUS7	Q99871	368 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	USP26	Q9BXU7	913 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	IL25	Q9H293	177 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SEC31B	Q9NQW1	1179 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	AKAP2	Q9Y2D5	859 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NDUFB9	Q9Y6M9	179 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ADAMTSL1	Q8N6G6	1762 aa		6.2	□□□□□ -1.42
KCNQ2-231	ENST00000636858		A0A0D9SFI3	127 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	HIP1	O00291	1037 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NPHP1	O15259	732 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	OSBP	P22059	807 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	MCC	P23508	829 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SSFA2	P28290	1259 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	GTF2E1	P29083	439 aa	Predicted RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	IGHMBP2	P38935	993 aa	Known RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TIMM10	P62072	90 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NMI	Q13287	307 aa	Predicted RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PUM3	Q15397	648 aa	Known RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TTC39A	Q5SRH9	613 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TRAPPC3L	Q5T215	181 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	GORAB	Q5T7V8	394 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	POTEA	Q6S8J7	498 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CWC27	Q6UX04	472 aa	Known RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	VGLL2	Q8N8G2	317 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RUFY2	Q8WXA3	655 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CDC5L	Q99459	802 aa	Known RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	KIF2C	Q99661	725 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	KRTAP4-8	Q9BYQ9	185 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TBC1D2	Q9BYX2	928 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RGS17	Q9UGC6	210 aa	Predicted RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RIPOR2	Q9Y4F9	1068 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CCDC171	Q6TFL3	1326 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	MROH5	Q6ZUA9	1318 aa		6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	DDX60L	Q5H9U9	1706 aa	Known RBP	6.19	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SCN9A	Q15858	1988 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	COL1A1	P02452	1464 aa	Predicted RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	GOLIM4	O00461	696 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	APBA3	O96018	575 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	IFIT1	P09914	478 aa	Known RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SLC5A1	P13866	664 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NFIX	Q14938	502 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	RABEP1	Q15276	862 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ZNF827	Q17R98	1081 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	DDX46	Q7L014	1031 aa	Known RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CCDC24	Q8N4L8	307 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CNBD1	Q8NA66	436 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	HELB	Q8NG08	1087 aa	Predicted RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	XAGE2	Q96GT9	111 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	FAM227B	Q96M60	508 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	MPHOSPH8	Q99549	860 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	LSG1	Q9H089	658 aa	Known RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	NPDC1	Q9NQX5	325 aa	Predicted RBP	6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PAG1	Q9NWQ8	432 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PALD1	Q9ULE6	856 aa		6.18	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PLSCR1	O15162	318 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PDE8B	O95263	885 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SLC10A3	P09131	477 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	GYS1	P13807	737 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SCARF1	Q14162	830 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SF3B3	Q15393	1217 aa	Known RBP	6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	CCDC158	Q5M9N0	1113 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SLC10A5	Q5PT55	438 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	KIAA1211	Q6ZU35	1233 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ANKRD18A	Q8IVF6	992 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	KBTBD3	Q8NAB2	608 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TMEM134	Q9H6X4	195 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PRDM9	Q9NQV7	894 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	SNRK	Q9NRH2	765 aa		6.17	□□□□□ -1.42
KCNQ2-231	ENST00000636858	EPB41L2	O43491	1005 aa	Known RBP	6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	TAF5L	O75529	589 aa		6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	FGFR2	P21802	821 aa		6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	HMGB2	P26583	209 aa	Known RBP	6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	ARID4A	P29374	1257 aa	Predicted RBP	6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	MCAM	P43121	646 aa		6.16	□□□□□ -1.42
KCNQ2-231	ENST00000636858	PHKA1	P46020	1223 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms