RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 DISP3Q9P2K9 1392 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 SHPRHQ149N8 1683 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 SPATA31A3Q5VYP0 1347 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 C9orf172C9J069 976 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 HOXD8P13378 290 aaPredicted RBP7.82□□□□□ -1.16
CLN8-210ENST00000636605 TARSP26639 723 aaKnown RBP7.82□□□□□ -1.16
CLN8-210ENST00000636605 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 ZNF772Q68DY9 489 aaPredicted RBP7.82□□□□□ -1.16
CLN8-210ENST00000636605 PMFBP1Q8TBY8 1022 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 TTC9Q92623 222 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 LENG1Q96BZ8 264 aaPredicted RBP7.82□□□□□ -1.16
CLN8-210ENST00000636605 RTCBQ9Y3I0 505 aaKnown RBP7.82□□□□□ -1.16
CLN8-210ENST00000636605 QRICH2Q9H0J4 1663 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 NINLQ9Y2I6 1382 aa7.82□□□□□ -1.16
CLN8-210ENST00000636605 ATP7BP35670 1465 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 PXDNQ92626 1479 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 ST20-MTHFSA0A0A6YYL1 179 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 DYRK3O43781 588 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 RGS9O75916 674 aaPredicted RBP7.81□□□□□ -1.16
CLN8-210ENST00000636605 RARAP10276 462 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 RAC1P63000 192 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 PLAURQ03405 335 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 KRT25Q7Z3Z0 450 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 TREML1Q86YW5 311 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 DTWD1Q8N5C7 304 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 PRIMPOLQ96LW4 560 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLN8-210ENST00000636605 KCNMB2Q9Y691 235 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 POLR3AO14802 1390 aaPredicted RBP7.81□□□□□ -1.16
CLN8-210ENST00000636605 PNPLA6Q8IY17 1366 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 USP47Q96K76 1375 aa7.81□□□□□ -1.16
CLN8-210ENST00000636605 ACEP12821 1306 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 TNS3Q68CZ2 1445 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 PPIP5K1Q6PFW1 1433 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 SASH3O75995 380 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 CPB1P15086 417 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 NRLP54845 237 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 DDX17Q92841 729 aaKnown RBP7.8□□□□□ -1.16
CLN8-210ENST00000636605 TERF2IPQ9NYB0 399 aa7.8□□□□□ -1.16
CLN8-210ENST00000636605 MED1Q15648 1581 aaPredicted RBP7.8□□□□□ -1.16
CLN8-210ENST00000636605 RGPD8O14715 1765 aaPredicted RBP7.79□□□□□ -1.16
CLN8-210ENST00000636605 USP32Q8NFA0 1604 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 TNFRSF10BO14763 440 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 PRMT3O60678 531 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 ATG7O95352 703 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 XPCQ01831 940 aaPredicted RBP7.79□□□□□ -1.16
CLN8-210ENST00000636605 FAM26DQ5JW98 314 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 HDGFL2Q7Z4V5 671 aaPredicted RBP7.79□□□□□ -1.16
CLN8-210ENST00000636605 TXNRD3Q86VQ6 643 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
CLN8-210ENST00000636605 SAP130Q9H0E3 1048 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 TLR7Q9NYK1 1049 aaKnown RBP7.79□□□□□ -1.16
CLN8-210ENST00000636605 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
CLN8-210ENST00000636605 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 XYLBO75191 536 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 NRG1Q02297 640 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 FOXD4L6Q3SYB3 417 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 FOXD4L3Q6VB84 417 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 NLRP13Q86W25 1043 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 DMRTC2Q8IXT2 367 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 RGL4Q8IZJ4 473 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 TESK2Q96S53 571 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 CXXC1Q9P0U4 656 aaPredicted RBP7.78□□□□□ -1.16
CLN8-210ENST00000636605 TTC21AQ8NDW8 1320 aa7.78□□□□□ -1.16
CLN8-210ENST00000636605 SOX18P35713 384 aa7.77□□□□□ -1.17
CLN8-210ENST00000636605 MLLT1Q03111 559 aaPredicted RBP7.77□□□□□ -1.17
CLN8-210ENST00000636605 TRIP4Q15650 581 aaPredicted RBP7.77□□□□□ -1.17
CLN8-210ENST00000636605 TMEM164Q5U3C3 297 aa7.77□□□□□ -1.17
CLN8-210ENST00000636605 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
CLN8-210ENST00000636605 FBXO11Q86XK2 927 aa7.77□□□□□ -1.17
CLN8-210ENST00000636605 TOPAZ1Q8N9V7 1692 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
CLN8-210ENST00000636605 CAPN12Q6ZSI9 719 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 C8orf37Q96NL8 207 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 USP6P35125 1406 aa7.76□□□□□ -1.17
CLN8-210ENST00000636605 KTN1Q86UP2 1357 aaKnown RBP7.75□□□□□ -1.17
CLN8-210ENST00000636605 MMP20O60882 483 aa7.75□□□□□ -1.17
CLN8-210ENST00000636605 DEAF1O75398 565 aaPredicted RBP7.75□□□□□ -1.17
CLN8-210ENST00000636605 KCNH5Q8NCM2 988 aa7.75□□□□□ -1.17
CLN8-210ENST00000636605 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
CLN8-210ENST00000636605 SMG9Q9H0W8 520 aaKnown RBP7.75□□□□□ -1.17
CLN8-210ENST00000636605 TRPC5Q9UL62 973 aaPredicted RBP7.75□□□□□ -1.17
CLN8-210ENST00000636605 AFF2P51816 1311 aa7.75□□□□□ -1.17
CLN8-210ENST00000636605 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
CLN8-210ENST00000636605 ZMYM1Q5SVZ6 1142 aa7.74□□□□□ -1.17
CLN8-210ENST00000636605 WFDC8Q8IUA0 241 aa7.74□□□□□ -1.17
CLN8-210ENST00000636605 CMTR1Q8N1G2 835 aaKnown RBP7.74□□□□□ -1.17
CLN8-210ENST00000636605 USP21Q9UK80 565 aa7.74□□□□□ -1.17
CLN8-210ENST00000636605 CPSF1Q10570 1443 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms