RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	SLC4A4	Q9Y6R1	1079 aa		11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	LAMA4	Q16363	1823 aa		11.46	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TIAM2	Q8IVF5	1701 aa		11.46	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CDK5RAP2	Q96SN8	1893 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	FOCAD	Q5VW36	1801 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SLC27A2	O14975	620 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	PRKAB2	O43741	272 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	FGA	P02671	866 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	BTD	P43251	543 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CRK	P46108	304 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SCNN1D	P51172	638 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TNIP1	Q15025	636 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ALX1	Q15699	326 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RNF20	Q5VTR2	975 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CREB3L3	Q68CJ9	461 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	IFNL3	Q8IZI9	196 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	AGBL3	Q8NEM8	1001 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TEKT1	Q969V4	418 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZDHHC15	Q96MV8	337 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	NOL10	Q9BSC4	688 aa	Known RBP	11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CTNNA3	Q9UI47	895 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SERPINA10	Q9UK55	444 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SNX14	Q9Y5W7	946 aa		11.45	□□□□□ -0.58
CACNA1A-223	ENST00000636058	APP	P05067	770 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CYP21A2	P08686	494 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	PLCG2	P16885	1265 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZKSCAN1	P17029	563 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	EIF6	P56537	245 aa	Known RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RHBDL3	P58872	404 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TSGA10IP	Q3SY00	556 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GIMAP6	Q6P9H5	292 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RASEF	Q8IZ41	740 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SDR42E1	Q8WUS8	393 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	NACAP1	Q9BZK3	213 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ECM29	Q5VYK3	1845 aa		11.44	□□□□□ -0.58
CACNA1A-223	ENST00000636058	DDX60L	Q5H9U9	1706 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZNF541	Q9H0D2	1346 aa		11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RPS12	P25398	132 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GPR162	Q16538	588 aa		11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	NAPB	Q9H115	298 aa		11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ATP8A2	Q9NTI2	1148 aa		11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	MKRN1	Q9UHC7	482 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TAF6L	Q9Y6J9	622 aa		11.43	□□□□□ -0.58
CACNA1A-223	ENST00000636058	NAV1	Q8NEY1	1877 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	LAMB1	P07942	1786 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GRIN3B	O60391	1043 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	USP17L8	P0C7I0	530 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TDO2	P48775	406 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	MMP14	P50281	582 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RABEP1	Q15276	862 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	IMMT	Q16891	758 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	OGFOD1	Q8N543	542 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RNF181	Q9P0P0	153 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	HDAC9	Q9UKV0	1011 aa		11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZNF213	O14771	459 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ANP32A	P39687	249 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ZNF280A	P59817	542 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	KRT32	Q14532	448 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ADCK5	Q3MIX3	580 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CFAP100	Q494V2	611 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	C9orf131	Q5VYM1	1079 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CDC42EP5	Q6NZY7	148 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TEX11	Q8IYF3	940 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GPC2	Q8N158	579 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	MTMR14	Q8NCE2	650 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TGFBRAP1	Q8WUH2	860 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	DPF2	Q92785	391 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	TM6SF1	Q9BZW5	370 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	NBPF3	Q9H094	633 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	USP40	Q9NVE5	1235 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	PCDHAC2	Q9Y5I4	1007 aa		11.41	□□□□□ -0.58
CACNA1A-223	ENST00000636058	FLT1	P17948	1338 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SPDYE2B	A6NHP3	402 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	WDHD1	O75717	1129 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SPDYE6	P0CI01	402 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	USP5	P45974	858 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GMPS	P49915	693 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	RBM5	P52756	815 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	HAND2	P61296	217 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SBK1	Q52WX2	424 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	CTR9	Q6PD62	1173 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	STOX1	Q6ZVD7	989 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	IL27	Q8NEV9	243 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	DDRGK1	Q96HY6	314 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	PRMT6	Q96LA8	375 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	ANAPC4	Q9UJX5	808 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	GJA3	Q9Y6H8	435 aa		11.4	□□□□□ -0.58
CACNA1A-223	ENST00000636058	SRCAP	Q6ZRS2	3230 aa		11.39	□□□□□ -0.59
CACNA1A-223	ENST00000636058	USP17L12	C9JPN9	530 aa		11.39	□□□□□ -0.59
CACNA1A-223	ENST00000636058	USP17L21	D6R901	530 aa		11.39	□□□□□ -0.59
CACNA1A-223	ENST00000636058		E7EWF7	191 aa		11.39	□□□□□ -0.59
CACNA1A-223	ENST00000636058	PSMA5	P28066	241 aa		11.39	□□□□□ -0.59
CACNA1A-223	ENST00000636058	PPARA	Q07869	468 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms