RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 PLCB4Q15147 1175 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 LGSNQ5TDP6 509 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 SEL1L2Q5TEA6 688 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 TMEM57Q8N5G2 664 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 MMRN2Q9H8L6 949 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 MAP3K4Q9Y6R4 1608 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 H0YCG3 227 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 PARP1P09874 1014 aaKnown RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 EPB41P11171 864 aaKnown RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 ALDH1B1P30837 517 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 POLR2BP30876 1174 aaKnown RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 BIRC3Q13489 604 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 AKAP4Q5JQC9 854 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 RPUSD2Q8IZ73 545 aaKnown RBP7.1□□□□□ -1.27
GABRB3-218ENST00000635994 CPLX3Q8WVH0 158 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 IWS1Q96ST2 819 aa7.1□□□□□ -1.27
GABRB3-218ENST00000635994 KLF18A0A0U1RQI7 1052 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 ARID5AQ03989 594 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 GPR162Q16538 588 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 SMCR8Q8TEV9 937 aaPredicted RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 ALG1Q9BT22 464 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 ZNF277Q9NRM2 450 aaPredicted RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 TRPC5Q9UL62 973 aaPredicted RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 ATF7P17544 494 aaPredicted RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 GABPAQ06546 454 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 GEN1Q17RS7 908 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC129Q6ZRS4 1044 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 DPH6Q7L8W6 267 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 VPS52Q8N1B4 723 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 LARGE2Q8N3Y3 721 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 TBC1D22AQ8WUA7 517 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 CARD10Q9BWT7 1032 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 ABCC3O15438 1527 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 RAD50Q92878 1312 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 IVLP07476 585 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 KRT2P35908 639 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 PLCD1P51178 756 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 TNNC1P63316 161 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 NLRX1Q86UT6 975 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 TRIML1Q8N9V2 468 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 WDR66Q8TBY9 1149 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 LZTS2Q9BRK4 669 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 SRRTQ9BXP5 876 aaKnown RBP7.09□□□□□ -1.27
GABRB3-218ENST00000635994 MCM9Q9NXL9 1143 aa7.09□□□□□ -1.27
GABRB3-218ENST00000635994 PCDH11XQ9BZA7 1347 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 PCDH11YQ9BZA8 1340 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 WDR46O15213 610 aaKnown RBP7.09□□□□□ -1.28
GABRB3-218ENST00000635994 XRCC6P12956 609 aaKnown RBP eCLIP7.09□□□□□ -1.28
GABRB3-218ENST00000635994 LTKP29376 864 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 SEPT6Q14141 434 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 SETDB1Q15047 1291 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 CHRNA2Q15822 529 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 PDZD4Q76G19 769 aaPredicted RBP7.09□□□□□ -1.28
GABRB3-218ENST00000635994 RSPH3Q86UC2 560 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 FAM193BQ96PV7 902 aaPredicted RBP7.09□□□□□ -1.28
GABRB3-218ENST00000635994 TSGA10Q9BZW7 698 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 MBD5Q9P267 1494 aa7.09□□□□□ -1.28
GABRB3-218ENST00000635994 CLTCQ00610 1675 aaKnown RBP7.09□□□□□ -1.28
GABRB3-218ENST00000635994 ANKRD36BQ8N2N9 1353 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CTAGE15A4D2H0 777 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CTAGE8P0CG41 777 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 NFKBIAP25963 317 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CCT2P78371 535 aaKnown RBP7.08□□□□□ -1.28
GABRB3-218ENST00000635994 SATB1Q01826 763 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 GNPTABQ3T906 1256 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 TTLL7Q6ZT98 887 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CTAGE6Q86UF2 777 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CTAGE4Q8IX94 777 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 SIRT1Q96EB6 747 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 RNF216Q9NWF9 866 aaPredicted RBP7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CALCOCO1Q9P1Z2 691 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 BCAP29Q9UHQ4 241 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CAMK4Q16566 473 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 SH2D4BQ5SQS7 431 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 GGA1Q9UJY5 639 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 AFG3L2Q9Y4W6 797 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 TYW5A2RUC4 315 aaKnown RBP7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CCNA1P78396 465 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 DTHD1Q6ZMT9 781 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 TMC6Q7Z403 805 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 MAIP1Q8WWC4 291 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 AGTPBP1Q9UPW5 1226 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 PLXNC1O60486 1568 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 ESYT2A0FGR8 921 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 XPOTO43592 962 aaKnown RBP7.08□□□□□ -1.28
GABRB3-218ENST00000635994 CALUO43852 315 aaPredicted RBP7.08□□□□□ -1.28
GABRB3-218ENST00000635994 ZEB2O60315 1214 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 GUCY1B3Q02153 619 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 ZSCAN30Q86W11 494 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 NME9Q86XW9 330 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 USHBP1Q8N6Y0 703 aa7.08□□□□□ -1.28
GABRB3-218ENST00000635994 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms