RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 BTDP43251 543 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 FKBP1BP68106 108 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 HTRA3P83110 453 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 MAP3K12Q12852 859 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 RASA3Q14644 834 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 FAM83AQ86UY5 434 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 ABT1Q9ULW3 272 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-209ENST00000634889 RPAP1Q9BWH6 1393 aaPredicted RBP17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 TCP10L2B9ZVM9 353 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 MX1P20591 662 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 SAPCD2Q86UD0 394 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 GBA2Q9HCG7 927 aaPredicted RBP17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 USP40Q9NVE5 1235 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 PAG1Q9NWQ8 432 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
CDC42BPB-209ENST00000634889 CNTNAP1P78357 1384 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 RASSF10A6NK89 507 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 GOLIM4O00461 696 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 ERC2O15083 957 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 CACNB3P54284 484 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 SUPT20HL1Q3ZLR7 823 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 PRAMEF18Q5VWM3 479 aa17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 NOL10Q9BSC4 688 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-209ENST00000634889 RFX7Q2KHR2 1363 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 BAG3O95817 575 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 PLCG2P16885 1265 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 NUCB1Q02818 461 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 CERS3Q8IU89 383 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 DNAJC5GQ8N7S2 189 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
CDC42BPB-209ENST00000634889 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 RHBDL3P58872 404 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 MAGEB6Q8N7X4 407 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 TEPSINQ96N21 525 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.467e-7■■■■■ 41.4
CDC42BPB-209ENST00000634889 TMEM39BQ9GZU3 492 aa17.9■□□□□ 0.46
CDC42BPB-209ENST00000634889 ENTPD3O75355 529 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 CYP7A1P22680 504 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 PPP4CP60510 307 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 SLC9C2Q5TAH2 1124 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 ADGRA1Q86SQ6 560 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 PI4K2BQ8TCG2 481 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 OTUD7AQ8TE49 926 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 KLRG1Q96E93 195 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 HOOK2Q96ED9 719 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 EDC3Q96F86 508 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 FAM198AQ9UFP1 575 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 MYH7P12883 1935 aa17.89■□□□□ 0.45
CDC42BPB-209ENST00000634889 FOCADQ5VW36 1801 aa17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 HUNKP57058 714 aa17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 NFIAQ12857 509 aa17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 ARMC9Q7Z3E5 817 aa17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 AATFQ9NY61 560 aaKnown RBP eCLIP17.88■□□□□ 0.45
CDC42BPB-209ENST00000634889 PPP1R12BO60237 982 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 PDE6AP16499 860 aa17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 RGS3P49796 1198 aa17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 MKRN1Q9UHC7 482 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 COL2A1P02458 1487 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-209ENST00000634889 CDK5RAP2Q96SN8 1893 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 UNCXA6NJT0 531 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 NEFLP07196 543 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 ECE1P42892 770 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 PDE1AP54750 535 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 TCP10Q12799 353 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 TTLL12Q14166 644 aaPredicted RBP17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 ZSCAN25Q6NSZ9 544 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 THSD7BQ9C0I4 1608 aa17.86■□□□□ 0.45
CDC42BPB-209ENST00000634889 TCRBV5S4A2TA0A5A2 114 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 ADD2P35612 726 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 UBE3CQ15386 1083 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 ATRNL1Q5VV63 1379 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 RGMBQ6NW40 437 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 CDAN1Q8IWY9 1227 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 TEX11Q8IYF3 940 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 DDX4Q9NQI0 724 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-209ENST00000634889 PICALMQ13492 652 aa17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 LDLRAD1Q5T700 205 aa17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 MOB2Q70IA6 237 aa17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 MIGA1Q8NAN2 632 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms