RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
TRAPPC9-216ENST00000634178 K7ELQ4 463 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 PAGE1O75459 146 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 BMP6P22004 513 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 ALAS2P22557 587 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 CDC27P30260 824 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 ARL4DP49703 201 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 PCBP4P57723 403 aaKnown RBP7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 BMS1Q14692 1282 aaKnown RBP7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 SEZ6Q53EL9 994 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 SULF2Q8IWU5 870 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 REXO1Q8N1G1 1221 aaKnown RBP7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 JARID2Q92833 1246 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 CBX8Q9HC52 389 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 PRKAG3Q9UGI9 489 aa7.35□□□□□ -1.23
TRAPPC9-216ENST00000634178 F13A1P00488 732 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 MCM4P33991 863 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 ETFBP38117 255 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 ZNF157P51786 506 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 EIF6P56537 245 aaKnown RBP7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 IKBKEQ14164 716 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 LRP10Q7Z4F1 713 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 FERD3LQ96RJ6 166 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 MRVI1Q9Y6F6 885 aa7.34□□□□□ -1.23
TRAPPC9-216ENST00000634178 ELOA3CA0A087WX78 387 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 C2CD2LO14523 706 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 RGS9O75916 674 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ESRRAP11474 423 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 SERINC3Q13530 473 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 RAB33AQ14088 237 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ZNF423Q2M1K9 1284 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 BNC2Q6ZN30 1099 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 PIF1Q9H611 641 aa7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 SOX17Q9H6I2 414 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC9-216ENST00000634178 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 FAM221AA4D161 298 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 ANKRD62A6NC57 917 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 H3BRJ5 948 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 TLR3O15455 904 aaKnown RBP7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 CILPO75339 1184 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 TRIM37O94972 964 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 CRKP46108 304 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 WNT8BQ93098 351 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 MBIPQ9NS73 344 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 PCDHB5Q9Y5E4 795 aa7.32□□□□□ -1.24
TRAPPC9-216ENST00000634178 KLF4O43474 513 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 IGHA1P01876 353 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 CYP11A1P05108 521 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 RPL6Q02878 288 aaKnown RBP7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 PRDM2Q13029 1718 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 FBXW10Q5XX13 1052 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 PSAPL1Q6NUJ1 521 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 REC114Q7Z4M0 266 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 SHDQ96IW2 340 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 SRPK1Q96SB4 655 aaKnown RBP7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 LPIN3Q9BQK8 851 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 GDF2Q9UK05 429 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 TRIM33Q9UPN9 1127 aa7.31□□□□□ -1.24
TRAPPC9-216ENST00000634178 CHD1O14646 1710 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 EIF4G3O43432 1585 aaKnown RBP7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 GIPRP48546 466 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 SEPT6Q14141 434 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 MLECQ14165 292 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 XP32Q5T750 250 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 GOLGA6L1Q8N7Z2 621 aa7.3□□□□□ -1.24
TRAPPC9-216ENST00000634178 NEURL1BA8MQ27 555 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 GSTP1P09211 210 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 PIP4K2BP78356 416 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 LRRFIP1Q32MZ4 808 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 HP1BP3Q5SSJ5 553 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 RBBP8NLQ8NC74 664 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 FBXO27Q8NI29 283 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 BRMS1Q9HCU9 246 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 OSGEPQ9NPF4 335 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 SH2B1Q9NRF2 756 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 NAGPAQ9UK23 515 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 ZNRF3Q9ULT6 936 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 PPT2Q9UMR5 302 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 PPME1Q9Y570 386 aa7.29□□□□□ -1.24
TRAPPC9-216ENST00000634178 SOX1O00570 391 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC9-216ENST00000634178 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms