RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 BTDP43251 543 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 CRKP46108 304 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 APOBEC3HQ6NTF7 200 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 AGBL3Q8NEM8 1001 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 AIDAQ96BJ3 306 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 TNIP1Q15025 636 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 ALX1Q15699 326 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
PHACTR4-209ENST00000633371 LAMB1P07942 1786 aa17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 FGAP02671 866 aa17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 EIF6P56537 245 aaKnown RBP17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 SDR42E1Q8WUS8 393 aa17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
PHACTR4-209ENST00000633371 SRCAPQ6ZRS2 3230 aa17.02■□□□□ 0.31
PHACTR4-209ENST00000633371 SMIM22K7EJ46 135 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 SLC27A2O14975 620 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 GMPSP49915 693 aaPredicted RBP17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 SLF2Q8IX21 1173 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
PHACTR4-209ENST00000633371 ZNF280AP59817 542 aaPredicted RBP17■□□□□ 0.31
PHACTR4-209ENST00000633371 CFAP100Q494V2 611 aa17■□□□□ 0.31
PHACTR4-209ENST00000633371 PRMT6Q96LA8 375 aaPredicted RBP17■□□□□ 0.31
PHACTR4-209ENST00000633371 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
PHACTR4-209ENST00000633371 GJA3Q9Y6H8 435 aa17■□□□□ 0.31
PHACTR4-209ENST00000633371 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
PHACTR4-209ENST00000633371 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
PHACTR4-209ENST00000633371 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 EGFRP00533 1210 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 CYP21A2P08686 494 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 GNAT2P19087 354 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 RPS12P25398 132 aaKnown RBP16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 EVX2Q03828 476 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 DPF2Q92785 391 aa16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
PHACTR4-209ENST00000633371 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 WDHD1O75717 1129 aaPredicted RBP16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 BAG3O95817 575 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 MTMR14Q8NCE2 650 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 NKX2-3Q8TAU0 364 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
PHACTR4-209ENST00000633371 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 GIMAP6Q6P9H5 292 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 GPC2Q8N158 579 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
PHACTR4-209ENST00000633371 CYP2D7A0A087X1C5 515 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 APPP05067 770 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 CYP2D6P10635 497 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 PLCG2P16885 1265 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 HAND2P61296 217 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 NFIAQ12857 509 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 CNOT7Q9UIV1 285 aaKnown RBP16.96■□□□□ 0.31
PHACTR4-209ENST00000633371 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 CACNB3P54284 484 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 ANAPC15P60006 121 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 NAPBQ9H115 298 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 INCENPQ9NQS7 918 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
PHACTR4-209ENST00000633371 FLT1P17948 1338 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms