RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 H3BRB1 525 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 BIN1O00499 593 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 NDUFB5O43674 189 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 CPNE3O75131 537 aaKnown RBP6.79□□□□□ -1.32
CHD2-219ENST00000630016 JAG1P78504 1218 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 PTPN12Q05209 780 aaKnown RBP6.79□□□□□ -1.32
CHD2-219ENST00000630016 PDE3BQ13370 1112 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 OGFOD3Q6PK18 319 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 SEZ6L2Q6UXD5 910 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 GLYCTKQ8IVS8 523 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 BCL7CQ8WUZ0 217 aaPredicted RBP6.79□□□□□ -1.32
CHD2-219ENST00000630016 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
CHD2-219ENST00000630016 PIDD1Q9HB75 910 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 C1GALT1Q9NS00 363 aa6.79□□□□□ -1.32
CHD2-219ENST00000630016 DYNC1LI2O43237 492 aaPredicted RBP6.78□□□□□ -1.32
CHD2-219ENST00000630016 ICMTO60725 284 aa6.78□□□□□ -1.32
CHD2-219ENST00000630016 C8AP07357 584 aa6.78□□□□□ -1.32
CHD2-219ENST00000630016 USPL1Q5W0Q7 1092 aa6.78□□□□□ -1.32
CHD2-219ENST00000630016 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
CHD2-219ENST00000630016 ZNF574Q6ZN55 896 aaPredicted RBP6.77□□□□□ -1.33
CHD2-219ENST00000630016 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
CHD2-219ENST00000630016 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
CHD2-219ENST00000630016 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 PAPLNO95428 1278 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 ORC1Q13415 861 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 ZNF792Q3KQV3 632 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 RPS26P11Q5JNZ5 115 aaPredicted RBP6.76□□□□□ -1.33
CHD2-219ENST00000630016 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
CHD2-219ENST00000630016 ABCB6Q9NP58 842 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
CHD2-219ENST00000630016 GADD45BO75293 160 aaPredicted RBP6.75□□□□□ -1.33
CHD2-219ENST00000630016 SLFN14P0C7P3 912 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 ID3Q02535 119 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 NETO1Q8TDF5 533 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 FAM129BQ96TA1 746 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 TRAK1Q9UPV9 953 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 USTQ9Y2C2 406 aa6.75□□□□□ -1.33
CHD2-219ENST00000630016 FAM87AP0C7U9 286 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 LIG1P18858 919 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 CDK5R2Q13319 367 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 DNAJC25Q9H1X3 360 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
CHD2-219ENST00000630016 SERPINB4P48594 390 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 SMYD4Q8IYR2 804 aaPredicted RBP6.73□□□□□ -1.33
CHD2-219ENST00000630016 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
CHD2-219ENST00000630016 FANCD2OSQ96PS1 177 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
CHD2-219ENST00000630016 CCDC86Q9H6F5 360 aaKnown RBP6.73□□□□□ -1.33
CHD2-219ENST00000630016 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
CHD2-219ENST00000630016 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 FUT4P22083 530 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
CHD2-219ENST00000630016 ARHGAP4P98171 946 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
CHD2-219ENST00000630016 FAM181AQ8N9Y4 354 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
CHD2-219ENST00000630016 RC3H2Q9HBD1 1191 aaKnown RBP6.72□□□□□ -1.33
CHD2-219ENST00000630016 EIF1AYO14602 144 aaKnown RBP6.71□□□□□ -1.34
CHD2-219ENST00000630016 RNGTTO60942 597 aaKnown RBP6.71□□□□□ -1.34
CHD2-219ENST00000630016 GSTP1P09211 210 aaKnown RBP6.71□□□□□ -1.34
CHD2-219ENST00000630016 PRKCQQ04759 706 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 BNIP3Q12983 259 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
CHD2-219ENST00000630016 MKNK2Q9HBH9 465 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
CHD2-219ENST00000630016 VAV3Q9UKW4 847 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 CCDC180Q9P1Z9 1646 aa6.71□□□□□ -1.34
CHD2-219ENST00000630016 GPR182O15218 404 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 ZNF862O60290 1169 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 CD8BP10966 210 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 FAAP100Q0VG06 881 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
CHD2-219ENST00000630016 DTHD1Q6ZMT9 781 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 FAM168AQ92567 244 aa6.7□□□□□ -1.34
CHD2-219ENST00000630016 CEACAM5P06731 702 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 HCLS1P14317 486 aaPredicted RBP6.69□□□□□ -1.34
CHD2-219ENST00000630016 GRM2Q14416 872 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 ECM1Q16610 540 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
CHD2-219ENST00000630016 PI4K2BQ8TCG2 481 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 HRASLS5Q96KN8 279 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 NIF3L1Q9GZT8 377 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 PCOLCE2Q9UKZ9 415 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 PCDHGC5Q9Y5F6 944 aa6.69□□□□□ -1.34
CHD2-219ENST00000630016 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
CHD2-219ENST00000630016 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
CHD2-219ENST00000630016 PKN1Q16512 942 aa6.68□□□□□ -1.34
CHD2-219ENST00000630016 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
CHD2-219ENST00000630016 KCNB2Q92953 911 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms