RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 MRIQ9BWK5 157 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 PRDX5P30044 214 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 TCP10Q12799 353 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 TFCP2Q12800 502 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 CRHR2Q13324 411 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 CDC42EP5Q6NZY7 148 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 CENPQQ7L2Z9 268 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 WDR66Q8TBY9 1149 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 COPRSQ9NQ92 184 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 ZBTB40Q9NUA8 1239 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
SPTAN1-219ENST00000629378 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 IGHDP01880 384 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 NFIAQ12857 509 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 TMOD2Q9NZR1 351 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
SPTAN1-219ENST00000629378 MAST3O60307 1309 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 PKN2Q16513 984 aaKnown RBP11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 CSADQ9Y600 493 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
SPTAN1-219ENST00000629378 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 PNMA6EA0A0J9YXQ4 647 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 A0A1B0GUL7 405 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 GNAI3P08754 354 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 INPP5BP32019 993 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 CCL15Q16663 113 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 FKBP1CQ5VVH2 108 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 OTOP1Q7RTM1 612 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 FAM151AQ8WW52 585 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 DENND2AQ9ULE3 1009 aa11.16□□□□□ -0.62
SPTAN1-219ENST00000629378 ZSWIM8A7E2V4 1837 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 IRF6O14896 467 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 RASGRF1Q13972 1273 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 HDAC5Q9UQL6 1122 aa11.15□□□□□ -0.62
SPTAN1-219ENST00000629378 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 GNAI2P04899 355 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 GTF2A2P52657 109 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 SP3Q02447 781 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 MTX1Q13505 466 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 PI16Q6UXB8 463 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 ZNF341Q9BYN7 854 aa11.14□□□□□ -0.63
SPTAN1-219ENST00000629378 HTTP42858 3142 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 SEMA3EO15041 775 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 RGS3P49796 1198 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 HDAC1Q13547 482 aaPredicted RBP11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 ERO1BQ86YB8 467 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 ZNF112Q9UJU3 913 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 PTPN22Q9Y2R2 807 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 CENPFP49454 3210 aa11.13□□□□□ -0.63
SPTAN1-219ENST00000629378 DDTLA6NHG4 134 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-219ENST00000629378 CETPP11597 493 aa11.12□□□□□ -0.63
SPTAN1-219ENST00000629378 MECOMQ03112 1051 aa11.12□□□□□ -0.63
SPTAN1-219ENST00000629378 G3BP1Q13283 466 aaKnown RBP eCLIP11.12□□□□□ -0.632e-7■■■■□ 25.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms