RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 GYG1P46976 350 aa15.23■□□□□ 0.03
CHD2-218ENST00000629346 GCKRQ14397 625 aa15.23■□□□□ 0.03
CHD2-218ENST00000629346 GRIK5Q16478 980 aa15.23■□□□□ 0.03
CHD2-218ENST00000629346 TDRD7Q8NHU6 1098 aaKnown RBP15.23■□□□□ 0.03
CHD2-218ENST00000629346 HOOK2Q96ED9 719 aa15.23■□□□□ 0.03
CHD2-218ENST00000629346 PARK7Q99497 189 aaKnown RBP15.23■□□□□ 0.03
CHD2-218ENST00000629346 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
CHD2-218ENST00000629346 TNPO2O14787 897 aaKnown RBP15.22■□□□□ 0.03
CHD2-218ENST00000629346 CAPN2P17655 700 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
CHD2-218ENST00000629346 MOGSQ13724 837 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 DCAF15Q66K64 600 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 TMOD2Q9NZR1 351 aa15.22■□□□□ 0.03
CHD2-218ENST00000629346 HIBADHP31937 336 aaKnown RBP15.21■□□□□ 0.03
CHD2-218ENST00000629346 CASP7P55210 303 aa15.21■□□□□ 0.03
CHD2-218ENST00000629346 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
CHD2-218ENST00000629346 ZNF594Q96JF6 807 aaPredicted RBP15.21■□□□□ 0.03
CHD2-218ENST00000629346 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHD2-218ENST00000629346 IQSEC3Q9UPP2 1182 aaPredicted RBP15.21■□□□□ 0.03
CHD2-218ENST00000629346 KCNH4Q9UQ05 1017 aa15.21■□□□□ 0.03
CHD2-218ENST00000629346 GNAI1P63096 354 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
CHD2-218ENST00000629346 GPAT2Q6NUI2 795 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 G2E3Q7L622 706 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 TEKT1Q969V4 418 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 CNNM1Q9NRU3 951 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 MGAMO43451 1857 aa15.2■□□□□ 0.02
CHD2-218ENST00000629346 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
CHD2-218ENST00000629346 IRF5Q13568 498 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 TAF7LQ5H9L4 462 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 FAM83AQ86UY5 434 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 FAM84BQ96KN1 310 aaPredicted RBP15.19■□□□□ 0.02
CHD2-218ENST00000629346 STK31Q9BXU1 1019 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
CHD2-218ENST00000629346 MDM2Q00987 491 aaPredicted RBP15.18■□□□□ 0.02
CHD2-218ENST00000629346 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD2-218ENST00000629346 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
CHD2-218ENST00000629346 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
CHD2-218ENST00000629346 EYSQ5T1H1 3165 aa15.18■□□□□ 0.02
CHD2-218ENST00000629346 A0A1B0GUL6 1792 aa15.18■□□□□ 0.02
CHD2-218ENST00000629346 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 COL9A1P20849 921 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 FOXO4P98177 505 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 COA7Q96BR5 231 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
CHD2-218ENST00000629346 LAMA2P24043 3122 aaKnown RBP15.16■□□□□ 0.02
CHD2-218ENST00000629346 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
CHD2-218ENST00000629346 HDLBPQ00341 1268 aaKnown RBP15.16■□□□□ 0.02
CHD2-218ENST00000629346 TCP10Q12799 353 aa15.16■□□□□ 0.02
CHD2-218ENST00000629346 CCDC57Q2TAC2 916 aa15.16■□□□□ 0.02
CHD2-218ENST00000629346 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
CHD2-218ENST00000629346 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
CHD2-218ENST00000629346 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
CHD2-218ENST00000629346 CXCL11O14625 94 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 TRIM32Q13049 653 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 FAM109BQ6ICB4 259 aaPredicted RBP15.15■□□□□ 0.02
CHD2-218ENST00000629346 LMBR1LQ6UX01 489 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 SMCR8Q8TEV9 937 aaPredicted RBP15.15■□□□□ 0.02
CHD2-218ENST00000629346 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 ZHX2Q9Y6X8 837 aa15.15■□□□□ 0.02
CHD2-218ENST00000629346 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
CHD2-218ENST00000629346 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
CHD2-218ENST00000629346 FASTKD5Q7L8L6 764 aaKnown RBP15.14■□□□□ 0.01
CHD2-218ENST00000629346 ANKRD13CQ8N6S4 541 aa15.14■□□□□ 0.01
CHD2-218ENST00000629346 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
CHD2-218ENST00000629346 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
CHD2-218ENST00000629346 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
CHD2-218ENST00000629346 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 ZNF697Q5TEC3 545 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 MAFAQ8NHW3 353 aaPredicted RBP15.13■□□□□ 0.01
CHD2-218ENST00000629346 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 FAM151AQ8WW52 585 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 DNAAF4Q8WXU2 420 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 PRUNE2Q8WUY3 3088 aa15.13■□□□□ 0.01
CHD2-218ENST00000629346 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 DDX60LQ5H9U9 1706 aaKnown RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 A0A0G2JLL6 359 aaPredicted RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 HMGCRP04035 888 aa15.12■□□□□ 0.01
CHD2-218ENST00000629346 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 RALBP1Q15311 655 aa15.12■□□□□ 0.01
CHD2-218ENST00000629346 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 PRRT2Q7Z6L0 340 aaPredicted RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 PUS3Q9BZE2 481 aaKnown RBP15.12■□□□□ 0.01
CHD2-218ENST00000629346 PFASO15067 1338 aa15.12■□□□□ 0.01
CHD2-218ENST00000629346 APAF1O14727 1248 aa15.11■□□□□ 0.01
CHD2-218ENST00000629346 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
CHD2-218ENST00000629346 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
CHD2-218ENST00000629346 PICK1Q9NRD5 415 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms