RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 VWA3AA6NCI4 1184 aa21.6■■□□□ 1.05
MECP2-218ENST00000629277 TOP1P11387 765 aaKnown RBP21.6■■□□□ 1.05
MECP2-218ENST00000629277 GNL2Q13823 731 aaKnown RBP21.6■■□□□ 1.05
MECP2-218ENST00000629277 TBC1D10CQ8IV04 446 aa21.6■■□□□ 1.05
MECP2-218ENST00000629277 STK11IPQ8N1F8 1099 aa21.6■■□□□ 1.05
MECP2-218ENST00000629277 MNS1Q8NEH6 495 aa21.6■■□□□ 1.05
MECP2-218ENST00000629277 PHLPP2Q6ZVD8 1323 aa21.6■■□□□ 1.05
MECP2-218ENST00000629277 MAP3K14Q99558 947 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 PCDHA5Q9Y5H7 936 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 LMTK3Q96Q04 1460 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 POLR3GO15318 223 aaPredicted RBP21.59■■□□□ 1.05
MECP2-218ENST00000629277 METAP2P50579 478 aaKnown RBP eCLIP21.59■■□□□ 1.05
MECP2-218ENST00000629277 TMEM139Q8IV31 216 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 APPBP2Q92624 585 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 WDR24Q96S15 920 aa21.59■■□□□ 1.05
MECP2-218ENST00000629277 TADA3O75528 432 aa21.58■■□□□ 1.05
MECP2-218ENST00000629277 ZRANB2O95218 330 aaKnown RBP eCLIP21.58■■□□□ 1.05
MECP2-218ENST00000629277 CCDC57Q2TAC2 916 aa21.58■■□□□ 1.05
MECP2-218ENST00000629277 CIAO1O76071 339 aa21.58■■□□□ 1.04
MECP2-218ENST00000629277 PDILTQ8N807 584 aa21.58■■□□□ 1.04
MECP2-218ENST00000629277 TMCO3Q6UWJ1 677 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.57■■□□□ 1.04
MECP2-218ENST00000629277 ADKP55263 362 aaKnown RBP21.57■■□□□ 1.04
MECP2-218ENST00000629277 GRIN1Q05586 938 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 ANGEL1Q9UNK9 670 aaKnown RBP21.57■■□□□ 1.04
MECP2-218ENST00000629277 PPP2R2CQ9Y2T4 447 aa21.57■■□□□ 1.04
MECP2-218ENST00000629277 B4E1Z4 1266 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 APPP05067 770 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 TAF3Q5VWG9 929 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 RESP18Q5W5W9 173 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 TOGARAM2Q6ZUX3 1019 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 CCDC191Q8NCU4 936 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 CNNM3Q8NE01 707 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 ZMYM6O95789 1325 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
MECP2-218ENST00000629277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
MECP2-218ENST00000629277 ZCCHC17Q9NP64 241 aaKnown RBP21.56■■□□□ 1.04
MECP2-218ENST00000629277 KCNH3Q9ULD8 1083 aa21.56■■□□□ 1.04
MECP2-218ENST00000629277 SASH3O75995 380 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 TRMT44Q8IYL2 757 aaKnown RBP21.55■■□□□ 1.04
MECP2-218ENST00000629277 ZBTB9Q96C00 473 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 CPDO75976 1380 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 CBFA2T2O43439 604 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 PPP6R2O75170 966 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 ZFYP08048 801 aaPredicted RBP21.55■■□□□ 1.04
MECP2-218ENST00000629277 MCAMP43121 646 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 FMR1Q06787 632 aaKnown RBP eCLIP21.55■■□□□ 1.04
MECP2-218ENST00000629277 APOA5Q6Q788 366 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 OLFM4Q6UX06 510 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 GRAMD1CQ8IYS0 662 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 DESI2Q9BSY9 194 aa21.55■■□□□ 1.04
MECP2-218ENST00000629277 GNG11P61952 73 aa21.54■■□□□ 1.04
MECP2-218ENST00000629277 TRDNQ13061 729 aa21.54■■□□□ 1.04
MECP2-218ENST00000629277 KRBA2Q6ZNG9 492 aa21.54■■□□□ 1.04
MECP2-218ENST00000629277 SH2B2O14492 632 aaPredicted RBP21.54■■□□□ 1.04
MECP2-218ENST00000629277 SLC9C2Q5TAH2 1124 aa21.54■■□□□ 1.04
MECP2-218ENST00000629277 TRERF1Q96PN7 1200 aa21.54■■□□□ 1.04
MECP2-218ENST00000629277 CCDC66A2RUB6 948 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 CCP110O43303 1012 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 PRR29P0C7W0 189 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 CYP2C19P33261 490 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 LRRFIP1Q32MZ4 808 aaKnown RBP21.53■■□□□ 1.04
MECP2-218ENST00000629277 CCDC102BQ68D86 513 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 TAF7LQ5H9L4 462 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 TICAM2Q86XR7 235 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 CCDC34Q96HJ3 373 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 BAG1Q99933 345 aaPredicted RBP21.53■■□□□ 1.04
MECP2-218ENST00000629277 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.53■■□□□ 1.04
MECP2-218ENST00000629277 IRX2Q9BZI1 471 aaPredicted RBP21.53■■□□□ 1.04
MECP2-218ENST00000629277 GLI3P10071 1580 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 UBN2Q6ZU65 1347 aa21.53■■□□□ 1.04
MECP2-218ENST00000629277 EFCAB8A8MWE9 144 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 TUBB4AP04350 444 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 FAM217BQ9NTX9 383 aaPredicted RBP21.52■■□□□ 1.04
MECP2-218ENST00000629277 ARGLU1Q9NWB6 273 aaPredicted RBP21.52■■□□□ 1.04
MECP2-218ENST00000629277 TMEM94Q12767 1356 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 ARHGAP6O43182 974 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 GUCY1A2P33402 732 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 NTRK3Q16288 839 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 TEX35Q5T0J7 233 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 NFXL1Q6ZNB6 911 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 ATG3Q9NT62 314 aa21.52■■□□□ 1.04
MECP2-218ENST00000629277 IDH1O75874 414 aaKnown RBP21.51■■□□□ 1.03
MECP2-218ENST00000629277 MTF1Q14872 753 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 KARSQ15046 597 aaKnown RBP21.51■■□□□ 1.03
MECP2-218ENST00000629277 CCDC82Q8N4S0 544 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 TC2NQ8N9U0 490 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 AKAP2Q9Y2D5 859 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 NFE2L3Q9Y4A8 694 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 TRPM3Q9HCF6 1732 aaPredicted RBP21.51■■□□□ 1.03
MECP2-218ENST00000629277 ZSCAN12O43309 604 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 TBC1D8O95759 1140 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 MDM2Q00987 491 aaPredicted RBP21.51■■□□□ 1.03
MECP2-218ENST00000629277 DHX8Q14562 1220 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms