RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 SHHQ15465 462 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 CSADQ9Y600 493 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 CACNA1BQ00975 2339 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 PDHXO00330 501 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 C7P10643 843 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 MRPS5P82675 430 aaKnown RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 SMAD3P84022 425 aaKnown RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 AIMP1Q12904 312 aaKnown RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 GRIN2CQ14957 1233 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 LRRC26Q2I0M4 334 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 C9orf50Q5SZB4 431 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 COPS6Q7L5N1 327 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 ERO1BQ86YB8 467 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 PPM1EQ8WY54 764 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 TEPSINQ96N21 525 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 LBHD1Q9BQE6 289 aaPredicted RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
TCF4-266ENST00000628689 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
TCF4-266ENST00000628689 MYO1BO43795 1136 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 GTF2IP78347 998 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 TMEM31Q5JXX7 168 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 ANKRD23Q86SG2 305 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 OGDHLQ9ULD0 1010 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
TCF4-266ENST00000628689 IRS4O14654 1257 aaPredicted RBP9.32□□□□□ -0.92
TCF4-266ENST00000628689 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
TCF4-266ENST00000628689 COL6A1P12109 1028 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
TCF4-266ENST00000628689 CERS5Q8N5B7 392 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 XAGE3Q8WTP9 111 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 KNSTRNQ9Y448 316 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 SPTBN4Q9H254 2564 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 DNAH12Q6ZR08 3092 aa9.32□□□□□ -0.92
TCF4-266ENST00000628689 PTPRZ1P23471 2315 aaPredicted RBP9.31□□□□□ -0.92
TCF4-266ENST00000628689 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
TCF4-266ENST00000628689 PPIL2Q13356 520 aa9.31□□□□□ -0.92
TCF4-266ENST00000628689 POTEEQ6S8J3 1075 aa9.31□□□□□ -0.92
TCF4-266ENST00000628689 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
TCF4-266ENST00000628689 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
TCF4-266ENST00000628689 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
TCF4-266ENST00000628689 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
TCF4-266ENST00000628689 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
TCF4-266ENST00000628689 F8W031 263 aaPredicted RBP9.3□□□□□ -0.92
TCF4-266ENST00000628689 ATP5J2-PTCD1G3V325 749 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 TNPO2O14787 897 aaKnown RBP9.3□□□□□ -0.92
TCF4-266ENST00000628689 CYP2C8P10632 490 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 BMP1P13497 986 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 TRIM32Q13049 653 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 MOGSQ13724 837 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 IL27Q8NEV9 243 aa9.3□□□□□ -0.92
TCF4-266ENST00000628689 ZKSCAN4Q969J2 545 aaPredicted RBP9.3□□□□□ -0.92
TCF4-266ENST00000628689 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
TCF4-266ENST00000628689 GPR37L1O60883 481 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 CCT4P50991 539 aaKnown RBP9.29□□□□□ -0.92
TCF4-266ENST00000628689 ANKRD18AQ8IVF6 992 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
TCF4-266ENST00000628689 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
TCF4-266ENST00000628689 TMEM39BQ9GZU3 492 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 OCEL1Q9H607 264 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 ZNF70Q9UC06 446 aaPredicted RBP9.29□□□□□ -0.92
TCF4-266ENST00000628689 METRNQ9UJH8 293 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 MINPP1Q9UNW1 487 aa9.29□□□□□ -0.92
TCF4-266ENST00000628689 HMGCRP04035 888 aa9.28□□□□□ -0.92
TCF4-266ENST00000628689 U2AF1L5P0DN76 240 aaPredicted RBP9.28□□□□□ -0.92
TCF4-266ENST00000628689 KLRK1P26718 216 aa9.28□□□□□ -0.92
TCF4-266ENST00000628689 U2AF1Q01081 240 aaKnown RBP eCLIP9.28□□□□□ -0.92
TCF4-266ENST00000628689 PPATQ06203 517 aa9.28□□□□□ -0.92
TCF4-266ENST00000628689 TNFAIP1Q13829 316 aa9.28□□□□□ -0.92
TCF4-266ENST00000628689 AKNAD1Q5T1N1 836 aa9.28□□□□□ -0.92
TCF4-266ENST00000628689 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
TCF4-266ENST00000628689 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
TCF4-266ENST00000628689 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
TCF4-266ENST00000628689 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
TCF4-266ENST00000628689 CCDC152Q4G0S7 254 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 GPAT2Q6NUI2 795 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 WRNIP1Q96S55 665 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 TDRD3Q9H7E2 651 aaKnown RBP9.27□□□□□ -0.93
TCF4-266ENST00000628689 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.93
TCF4-266ENST00000628689 KCNH4Q9UQ05 1017 aa9.27□□□□□ -0.93
TCF4-266ENST00000628689 TCP10L2B9ZVM9 353 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 SMIM22K7EJ46 135 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 NHLH1Q02575 133 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
TCF4-266ENST00000628689 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.93
TCF4-266ENST00000628689 COA7Q96BR5 231 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 CD209Q9NNX6 404 aa9.26□□□□□ -0.93
TCF4-266ENST00000628689 TRIM28Q13263 835 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms