RNA–Protein interactions for RNA: ENST00000628360.1

TCF4-263, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-263ENST00000628360 CAVIN4Q5BKX8 364 aa10.13□□□□□ -0.79
TCF4-263ENST00000628360 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
TCF4-263ENST00000628360 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
TCF4-263ENST00000628360 ELP3Q9H9T3 547 aa10.13□□□□□ -0.79
TCF4-263ENST00000628360 A0A1B0GUL6 1792 aa10.13□□□□□ -0.79
TCF4-263ENST00000628360 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 COL1A1P02452 1464 aaPredicted RBP10.12□□□□□ -0.79
TCF4-263ENST00000628360 IGF2BP3O00425 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
TCF4-263ENST00000628360 ALDH1A1P00352 501 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 GJA5P36382 358 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
TCF4-263ENST00000628360 MAP3K11Q16584 847 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 TMEM39BQ9GZU3 492 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 SERPINA10Q9UK55 444 aa10.12□□□□□ -0.79
TCF4-263ENST00000628360 UTYO14607 1347 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 E9PSI1 815 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
TCF4-263ENST00000628360 RABL6Q3YEC7 729 aaPredicted RBP10.11□□□□□ -0.79
TCF4-263ENST00000628360 FBXO46Q6PJ61 603 aaPredicted RBP10.11□□□□□ -0.79
TCF4-263ENST00000628360 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 FBXO33Q7Z6M2 555 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 ANKRD13AQ8IZ07 590 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 USP44Q9H0E7 712 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 SMC4Q9NTJ3 1288 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 TRIM17Q9Y577 477 aa10.11□□□□□ -0.79
TCF4-263ENST00000628360 PTPRCP08575 1304 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 PDE8BO95263 885 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 TNNI2P48788 182 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 INHBEP58166 350 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 CRHR2Q13324 411 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 OTUD7BQ6GQQ9 843 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 OPTNQ96CV9 577 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 TEPSINQ96N21 525 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 SIL1Q9H173 461 aa10.1□□□□□ -0.79
TCF4-263ENST00000628360 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
TCF4-263ENST00000628360 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
TCF4-263ENST00000628360 SLFN5Q08AF3 891 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 VGLL4Q14135 290 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 PUM3Q15397 648 aaKnown RBP10.09□□□□□ -0.79
TCF4-263ENST00000628360 NOM1Q5C9Z4 860 aaKnown RBP10.09□□□□□ -0.79
TCF4-263ENST00000628360 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.09□□□□□ -0.79
TCF4-263ENST00000628360 VGLL2Q8N8G2 317 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 CD99L2Q8TCZ2 262 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 TBC1D22AQ8WUA7 517 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 PTPN18Q99952 460 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 ECM29Q5VYK3 1845 aa10.09□□□□□ -0.79
TCF4-263ENST00000628360 TNRC18O15417 2968 aaPredicted RBP10.08□□□□□ -0.8
TCF4-263ENST00000628360 EYA2O00167 538 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
TCF4-263ENST00000628360 SLC5A1P13866 664 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
TCF4-263ENST00000628360 OTOP1Q7RTM1 612 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 CFHR5Q9BXR6 569 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 TMOD2Q9NZR1 351 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 CSADQ9Y600 493 aa10.08□□□□□ -0.8
TCF4-263ENST00000628360 CCL15-CCL14A0A0B4J2E2 113 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 UNCXA6NJT0 531 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
TCF4-263ENST00000628360 RFX5P48382 616 aaPredicted RBP10.07□□□□□ -0.8
TCF4-263ENST00000628360 TCP10Q12799 353 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 TAF1CQ15572 869 aaPredicted RBP10.07□□□□□ -0.8
TCF4-263ENST00000628360 CCL15Q16663 113 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 MIGA2Q7L4E1 593 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 BRI3BPQ8WY22 251 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
TCF4-263ENST00000628360 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 WRNIP1Q96S55 665 aa10.07□□□□□ -0.8
TCF4-263ENST00000628360 NOB1Q9ULX3 412 aaKnown RBP10.07□□□□□ -0.8
TCF4-263ENST00000628360 SLC34A2O95436 690 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 MYCP01106 439 aaPredicted RBP10.06□□□□□ -0.8
TCF4-263ENST00000628360 FGFR2P21802 821 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 GTF2A2P52657 109 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
TCF4-263ENST00000628360 SP3Q02447 781 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 APOBEC3HQ6NTF7 200 aaKnown RBP10.06□□□□□ -0.8
TCF4-263ENST00000628360 ATG9AQ7Z3C6 839 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
TCF4-263ENST00000628360 LPIN2Q92539 896 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 ZDHHC15Q96MV8 337 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 PA2G4Q9UQ80 394 aaKnown RBP10.06□□□□□ -0.8
TCF4-263ENST00000628360 MAST3O60307 1309 aa10.06□□□□□ -0.8
TCF4-263ENST00000628360 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
TCF4-263ENST00000628360 CAP1Q01518 475 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 ALDH1L2Q3SY69 923 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
TCF4-263ENST00000628360 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 PTPN22Q9Y2R2 807 aa10.05□□□□□ -0.8
TCF4-263ENST00000628360 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms