RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 CFAP100Q494V2 611 aa23.07■■□□□ 1.28
CNOT9-209ENST00000627282 ABT1Q9ULW3 272 aaKnown RBP23.07■■□□□ 1.28
CNOT9-209ENST00000627282 RASSF10A6NK89 507 aa23.06■■□□□ 1.28
CNOT9-209ENST00000627282 CELF2O95319 508 aaKnown RBP23.06■■□□□ 1.28
CNOT9-209ENST00000627282 ANGEL2Q5VTE6 544 aaKnown RBP23.06■■□□□ 1.28
CNOT9-209ENST00000627282 ZBED3Q96IU2 234 aaPredicted RBP23.06■■□□□ 1.28
CNOT9-209ENST00000627282 MRIQ9BWK5 157 aa23.06■■□□□ 1.28
CNOT9-209ENST00000627282 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
CNOT9-209ENST00000627282 ADM5C9JUS6 153 aa23.05■■□□□ 1.28
CNOT9-209ENST00000627282 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
CNOT9-209ENST00000627282 SULF1Q8IWU6 871 aa23.05■■□□□ 1.28
CNOT9-209ENST00000627282 MTMR14Q8NCE2 650 aa23.05■■□□□ 1.28
CNOT9-209ENST00000627282 TEKT1Q969V4 418 aa23.05■■□□□ 1.28
CNOT9-209ENST00000627282 POLR2AP24928 1970 aaKnown RBP23.05■■□□□ 1.28
CNOT9-209ENST00000627282 WNT10BO00744 389 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 RBM25P49756 843 aaKnown RBP23.04■■□□□ 1.28
CNOT9-209ENST00000627282 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 HHIPL2Q6UWX4 724 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 DLK2Q6UY11 383 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 KBTBD3Q8NAB2 608 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 PITPNM2Q9BZ72 1349 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 MYH2Q9UKX2 1941 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 SPDYE2BA6NHP3 402 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 IGSF3O75054 1194 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 SPDYE6P0CI01 402 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 RBM5P52756 815 aaKnown RBP eCLIP23.04■■□□□ 1.28
CNOT9-209ENST00000627282 DLGAP5Q15398 846 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 ZDHHC15Q96MV8 337 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 DAGLAQ9Y4D2 1042 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 GAKO14976 1311 aa23.04■■□□□ 1.28
CNOT9-209ENST00000627282 CHGBP05060 677 aa23.03■■□□□ 1.28
CNOT9-209ENST00000627282 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
CNOT9-209ENST00000627282 APOBEC3HQ6NTF7 200 aaKnown RBP23.03■■□□□ 1.28
CNOT9-209ENST00000627282 ADGRA1Q86SQ6 560 aa23.03■■□□□ 1.28
CNOT9-209ENST00000627282 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
CNOT9-209ENST00000627282 FAM163AQ96GL9 167 aaPredicted RBP23.03■■□□□ 1.28
CNOT9-209ENST00000627282 PRMT6Q96LA8 375 aaPredicted RBP23.03■■□□□ 1.28
CNOT9-209ENST00000627282 ZNF408Q9H9D4 720 aa23.03■■□□□ 1.28
CNOT9-209ENST00000627282 TLL2Q9Y6L7 1015 aa23.03■■□□□ 1.28
CNOT9-209ENST00000627282 PDE6AP16499 860 aa23.02■■□□□ 1.28
CNOT9-209ENST00000627282 BECN1Q14457 450 aa23.02■■□□□ 1.28
CNOT9-209ENST00000627282 DEFB115Q30KQ5 88 aa23.02■■□□□ 1.28
CNOT9-209ENST00000627282 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
CNOT9-209ENST00000627282 MROH7-TTC4A0A0A0MT08 1334 aa23.02■■□□□ 1.28
CNOT9-209ENST00000627282 VEGFBP49765 207 aa23.01■■□□□ 1.27
CNOT9-209ENST00000627282 GSTO1P78417 241 aa23.01■■□□□ 1.27
CNOT9-209ENST00000627282 SLFNL1Q499Z3 407 aa23.01■■□□□ 1.27
CNOT9-209ENST00000627282 EVI5LQ96CN4 794 aa23.01■■□□□ 1.27
CNOT9-209ENST00000627282 TCRBV5S4A2TA0A5A2 114 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 ADD2P35612 726 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 SAPCD2Q86UD0 394 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 SLF2Q8IX21 1173 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 TRIM6-TRIM34B2RNG4 842 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 CYP7A1P22680 504 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 SLC4A3P48751 1232 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 FSD1Q9BTV5 496 aa23■■□□□ 1.27
CNOT9-209ENST00000627282 DDX24Q9GZR7 859 aaKnown RBP eCLIP23■■□□□ 1.27
CNOT9-209ENST00000627282 MYH7P12883 1935 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 ZNF532Q9HCE3 1301 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 GPR75-ASB3A0A0A6YYF3 556 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 LDHCP07864 332 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 CASC1Q6TDU7 716 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 CDCA5Q96FF9 252 aa22.99■■□□□ 1.27
CNOT9-209ENST00000627282 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
CNOT9-209ENST00000627282 RILPL2Q969X0 211 aa22.98■■□□□ 1.27
CNOT9-209ENST00000627282 TDRD3Q9H7E2 651 aaKnown RBP22.98■■□□□ 1.27
CNOT9-209ENST00000627282 BTDP43251 543 aa22.97■■□□□ 1.27
CNOT9-209ENST00000627282 CLRN2A0PK11 232 aa22.97■■□□□ 1.27
CNOT9-209ENST00000627282 UBE3CQ15386 1083 aa22.97■■□□□ 1.27
CNOT9-209ENST00000627282 CDC42EP5Q6NZY7 148 aa22.97■■□□□ 1.27
CNOT9-209ENST00000627282 HHIPL1Q96JK4 782 aa22.97■■□□□ 1.27
CNOT9-209ENST00000627282 GBA2Q9HCG7 927 aaPredicted RBP22.97■■□□□ 1.27
CNOT9-209ENST00000627282 SCAF8Q9UPN6 1271 aaKnown RBP22.97■■□□□ 1.27
CNOT9-209ENST00000627282 SPDYE2Q495Y8 402 aa22.96■■□□□ 1.27
CNOT9-209ENST00000627282 ZSCAN25Q6NSZ9 544 aa22.96■■□□□ 1.27
CNOT9-209ENST00000627282 APOBEC3FQ8IUX4 373 aaKnown RBP22.96■■□□□ 1.27
CNOT9-209ENST00000627282 MIGA1Q8NAN2 632 aa22.96■■□□□ 1.27
CNOT9-209ENST00000627282 ZNF70Q9UC06 446 aaPredicted RBP22.96■■□□□ 1.27
CNOT9-209ENST00000627282 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.26
CNOT9-209ENST00000627282 RNF113AO15541 343 aaKnown RBP22.95■■□□□ 1.26
CNOT9-209ENST00000627282 RHBDL3P58872 404 aa22.95■■□□□ 1.26
CNOT9-209ENST00000627282 PAXIP1Q6ZW49 1069 aaPredicted RBP22.95■■□□□ 1.26
CNOT9-209ENST00000627282 CAPNS2Q96L46 248 aa22.95■■□□□ 1.26
CNOT9-209ENST00000627282 AATFQ9NY61 560 aaKnown RBP eCLIP22.95■■□□□ 1.26
CNOT9-209ENST00000627282 ECM29Q5VYK3 1845 aa22.95■■□□□ 1.26
CNOT9-209ENST00000627282 MYO1BO43795 1136 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 ZFYP08048 801 aaPredicted RBP22.94■■□□□ 1.26
CNOT9-209ENST00000627282 ECE1P42892 770 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 CACNB3P54284 484 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 PPP4CP60510 307 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 DYNLL1P63167 89 aaKnown RBP22.94■■□□□ 1.26
CNOT9-209ENST00000627282 C2orf69Q8N8R5 385 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 USP40Q9NVE5 1235 aa22.94■■□□□ 1.26
CNOT9-209ENST00000627282 CYP4F22Q6NT55 531 aa22.93■■□□□ 1.26
CNOT9-209ENST00000627282 RIOK1Q9BRS2 568 aaKnown RBP22.93■■□□□ 1.26
CNOT9-209ENST00000627282 AK9Q5TCS8 1911 aa22.93■■□□□ 1.26
CNOT9-209ENST00000627282 RFX7Q2KHR2 1363 aa22.93■■□□□ 1.26
CNOT9-209ENST00000627282 HUNKP57058 714 aa22.93■■□□□ 1.26
CNOT9-209ENST00000627282 LRRFIP1Q32MZ4 808 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms