RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 KLRK1P26718 216 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 RBM6P78332 1123 aaKnown RBP25.88■■□□□ 1.73
PNKP-220ENST00000627232 CRY2Q49AN0 593 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 ADGRA1Q86SQ6 560 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 RIOK1Q9BRS2 568 aaKnown RBP25.88■■□□□ 1.73
PNKP-220ENST00000627232 MTA3Q9BTC8 594 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 TXNRD1Q16881 649 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 MFSD6Q6ZSS7 791 aa25.88■■□□□ 1.73
PNKP-220ENST00000627232 RNF41Q9H4P4 317 aaPredicted RBP25.88■■□□□ 1.73
PNKP-220ENST00000627232 SYCE3A1L190 88 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 LETM1O95202 739 aaPredicted RBP25.87■■□□□ 1.73
PNKP-220ENST00000627232 CTDSPL2Q05D32 466 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 CCDC183Q5T5S1 534 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 ZNF772Q68DY9 489 aaPredicted RBP25.87■■□□□ 1.73
PNKP-220ENST00000627232 C15orf52Q6ZUT6 534 aaKnown RBP25.87■■□□□ 1.73
PNKP-220ENST00000627232 SGMS1Q86VZ5 419 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 IGDCC4Q8TDY8 1250 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 RPGRQ92834 1020 aaKnown RBP25.87■■□□□ 1.73
PNKP-220ENST00000627232 PANK2Q9BZ23 570 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 ANAPC4Q9UJX5 808 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 XDHP47989 1333 aa25.87■■□□□ 1.73
PNKP-220ENST00000627232 LIFRP42702 1097 aa25.86■■□□□ 1.73
PNKP-220ENST00000627232 TTC6Q86TZ1 520 aa25.86■■□□□ 1.73
PNKP-220ENST00000627232 BRIP1Q9BX63 1249 aa25.86■■□□□ 1.73
PNKP-220ENST00000627232 TFCP2L1Q9NZI6 479 aa25.86■■□□□ 1.73
PNKP-220ENST00000627232 FDPSP14324 419 aaKnown RBP25.85■■□□□ 1.73
PNKP-220ENST00000627232 GIMAP6Q6P9H5 292 aa25.85■■□□□ 1.73
PNKP-220ENST00000627232 NSUN4Q96CB9 384 aaKnown RBP25.85■■□□□ 1.73
PNKP-220ENST00000627232 PPARAQ07869 468 aa25.84■■□□□ 1.73
PNKP-220ENST00000627232 SPTY2D1Q68D10 685 aaPredicted RBP25.84■■□□□ 1.73
PNKP-220ENST00000627232 ATL3Q6DD88 541 aa25.84■■□□□ 1.73
PNKP-220ENST00000627232 RBM17Q96I25 401 aaKnown RBP25.84■■□□□ 1.73
PNKP-220ENST00000627232 ANKIB1Q9P2G1 1089 aa25.84■■□□□ 1.73
PNKP-220ENST00000627232 CPLX1O14810 134 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 FAM173BQ6P4H8 233 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 PROM2Q8N271 834 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 NKX2-3Q8TAU0 364 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 LY9Q9HBG7 655 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 ZSWIM5Q9P217 1185 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 CFAP45Q9UL16 551 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 TACC3Q9Y6A5 838 aa25.83■■□□□ 1.73
PNKP-220ENST00000627232 KDM4AO75164 1064 aa25.83■■□□□ 1.72
PNKP-220ENST00000627232 NASPP49321 788 aaPredicted RBP25.83■■□□□ 1.72
PNKP-220ENST00000627232 TMEM67Q5HYA8 995 aa25.83■■□□□ 1.72
PNKP-220ENST00000627232 APOA5Q6Q788 366 aa25.83■■□□□ 1.72
PNKP-220ENST00000627232 ZNF384Q8TF68 577 aa25.83■■□□□ 1.72
PNKP-220ENST00000627232 SPATA32Q96LK8 384 aa25.83■■□□□ 1.72
PNKP-220ENST00000627232 DUOX1Q9NRD9 1551 aa25.82■■□□□ 1.72
PNKP-220ENST00000627232 PLSCR1O15162 318 aa25.82■■□□□ 1.72
PNKP-220ENST00000627232 CDKL5O76039 1030 aa25.82■■□□□ 1.72
PNKP-220ENST00000627232 METAP2P50579 478 aaKnown RBP eCLIP25.82■■□□□ 1.72
PNKP-220ENST00000627232 MECOMQ03112 1051 aa25.82■■□□□ 1.72
PNKP-220ENST00000627232 LEO1Q8WVC0 666 aaPredicted RBP25.82■■□□□ 1.72
PNKP-220ENST00000627232 NID2Q14112 1375 aa25.82■■□□□ 1.72
PNKP-220ENST00000627232 POLRMTO00411 1230 aaKnown RBP25.81■■□□□ 1.72
PNKP-220ENST00000627232 IFIT3O14879 490 aaKnown RBP25.81■■□□□ 1.72
PNKP-220ENST00000627232 HOXA10P31260 410 aaPredicted RBP25.81■■□□□ 1.72
PNKP-220ENST00000627232 CPLX2Q6PUV4 134 aaKnown RBP25.81■■□□□ 1.72
PNKP-220ENST00000627232 TXNRD3Q86VQ6 643 aa25.81■■□□□ 1.72
PNKP-220ENST00000627232 WDR66Q8TBY9 1149 aa25.81■■□□□ 1.72
PNKP-220ENST00000627232 ORC3Q9UBD5 711 aaPredicted RBP25.81■■□□□ 1.72
PNKP-220ENST00000627232 KLRG2A4D1S0 409 aaPredicted RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 BBOX1O75936 387 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 PCP11498 1178 aaKnown RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 DYNLL1P63167 89 aaKnown RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 DDR1Q08345 913 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 SART3Q15020 963 aaKnown RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 ZNF804AQ7Z570 1209 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 TDRD7Q8NHU6 1098 aaKnown RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 SDR42E1Q8WUS8 393 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 RBSNQ9H1K0 784 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 INCENPQ9NQS7 918 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 LRRC37AA6NMS7 1700 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 LAMB1P07942 1786 aa25.8■■□□□ 1.72
PNKP-220ENST00000627232 BAZ2AQ9UIF9 1905 aaKnown RBP25.8■■□□□ 1.72
PNKP-220ENST00000627232 NRXN2Q9P2S2 1712 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 ZBTB43O43298 467 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 ATP2B4P23634 1241 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 CHAF1AQ13111 956 aaPredicted RBP25.79■■□□□ 1.72
PNKP-220ENST00000627232 NFXL1Q6ZNB6 911 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 TMTC2Q8N394 836 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 ZNF396Q96N95 335 aaPredicted RBP25.79■■□□□ 1.72
PNKP-220ENST00000627232 CRAMP1Q96RY5 1269 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 TSPY26PQ9H489 355 aa25.79■■□□□ 1.72
PNKP-220ENST00000627232 TFIP11Q9UBB9 837 aaKnown RBP25.79■■□□□ 1.72
PNKP-220ENST00000627232 RCAN1P53805 252 aa25.78■■□□□ 1.72
PNKP-220ENST00000627232 C8orf76Q96K31 380 aa25.78■■□□□ 1.72
PNKP-220ENST00000627232 CCDC69A6NI79 296 aa25.78■■□□□ 1.72
PNKP-220ENST00000627232 ADD1P35611 737 aaKnown RBP25.78■■□□□ 1.72
PNKP-220ENST00000627232 TMC4Q7Z404 712 aa25.78■■□□□ 1.72
PNKP-220ENST00000627232 CRNKL1Q9BZJ0 848 aaKnown RBP25.78■■□□□ 1.72
PNKP-220ENST00000627232 ECM29Q5VYK3 1845 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 PRDX5P30044 214 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 SYNE3Q6ZMZ3 975 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 FBXO18Q8NFZ0 1043 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 ANP32BQ92688 251 aaKnown RBP25.77■■□□□ 1.72
PNKP-220ENST00000627232 SENP2Q9HC62 589 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 SLC12A7Q9Y666 1083 aa25.77■■□□□ 1.72
PNKP-220ENST00000627232 ANKRD31Q8N7Z5 1873 aa25.76■■□□□ 1.71
PNKP-220ENST00000627232 ERICH2A1L162 156 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms