RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 LDHBP07195 334 aaKnown RBP11.69□□□□□ -0.54
CHD2-210ENST00000627200 TIMM10P62072 90 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 TFCP2Q12800 502 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 CCL15Q16663 113 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 CCDC102BQ68D86 513 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 OTOP1Q7RTM1 612 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 ZFPM1Q8IX07 1006 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 ARHGAP45Q92619 1136 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 MRIQ9BWK5 157 aa11.69□□□□□ -0.54
CHD2-210ENST00000627200 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 PNMA6EA0A0J9YXQ4 647 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 GNAI3P08754 354 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 INPP5BP32019 993 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 MTX1Q13505 466 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 MIER1Q8N108 512 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
CHD2-210ENST00000627200 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 DENND2AQ9ULE3 1009 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
CHD2-210ENST00000627200 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 IRF6O14896 467 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 GTF2A2P52657 109 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHD2-210ENST00000627200 OTUD7BQ6GQQ9 843 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 PI16Q6UXB8 463 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
CHD2-210ENST00000627200 AK9Q5TCS8 1911 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 SEMA3EO15041 775 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 TAF1CQ15572 869 aaPredicted RBP11.66□□□□□ -0.54
CHD2-210ENST00000627200 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 DZIP1Q86YF9 867 aaKnown RBP11.66□□□□□ -0.54
CHD2-210ENST00000627200 FAM151AQ8WW52 585 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 ERO1AQ96HE7 468 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 ZNF341Q9BYN7 854 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 CENPFP49454 3210 aa11.66□□□□□ -0.54
CHD2-210ENST00000627200 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 GAKO14976 1311 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 BTBD19C9JJ37 291 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
CHD2-210ENST00000627200 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
CHD2-210ENST00000627200 GNAI2P04899 355 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 RGS3P49796 1198 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 SP3Q02447 781 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
CHD2-210ENST00000627200 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 NEUROD6Q96NK8 337 aa11.65□□□□□ -0.54
CHD2-210ENST00000627200 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
CHD2-210ENST00000627200 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
CHD2-210ENST00000627200 CETPP11597 493 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 RLBP1P12271 317 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 BTDP43251 543 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 PPIL2Q13356 520 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 SNAPC2Q13487 334 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 MVPQ14764 893 aaKnown RBP11.64□□□□□ -0.55
CHD2-210ENST00000627200 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 HOOK2Q96ED9 719 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 EFCC1Q9HA90 598 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
CHD2-210ENST00000627200 MROH7-TTC4A0A0A0MT08 1334 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 PDS5AQ29RF7 1337 aaKnown RBP11.63□□□□□ -0.55
CHD2-210ENST00000627200 BRCA2P51587 3418 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 MECOMQ03112 1051 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 PICALMQ13492 652 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.63□□□□□ -0.55
CHD2-210ENST00000627200 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
CHD2-210ENST00000627200 DDTLA6NHG4 134 aaPredicted RBP11.62□□□□□ -0.55
CHD2-210ENST00000627200 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 ZBTB22O15209 634 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 MCAMP43121 646 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 RHBDL3P58872 404 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 PPATQ06203 517 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 MOGSQ13724 837 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 DIEXFQ68CQ4 756 aaKnown RBP11.62□□□□□ -0.55
CHD2-210ENST00000627200 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
CHD2-210ENST00000627200 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
CHD2-210ENST00000627200 SPATA5Q8NB90 893 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 IDI2Q9BXS1 227 aa11.62□□□□□ -0.55
CHD2-210ENST00000627200 PTCH2Q9Y6C5 1203 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms