RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 UBE3CQ15386 1083 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 SLFNL1Q499Z3 407 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 CBX8Q9HC52 389 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 BPIFA3Q9BQP9 254 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 KIF3AQ9Y496 699 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CTSWP56202 376 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC158Q5M9N0 1113 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC24Q8N4L8 307 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 MYRIPQ8NFW9 859 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 LRRC2Q9BYS8 371 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 TNMDQ9H2S6 317 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 GOLPH3LQ9H4A5 285 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 MORC2Q9Y6X9 1032 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 MYH13Q9UKX3 1938 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 MCAMP43121 646 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 NOLC1Q14978 699 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
CTNNA1-244ENST00000627109 FGAP02671 866 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 IL6STP40189 918 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 PROM2Q8N271 834 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 PUS7LQ9H0K6 701 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 SBF2Q86WG5 1849 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 CKAP2LQ8IYA6 745 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 LINC00116Q8NCU8 138 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 UQCRHLA0A096LP55 91 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 YEATS4O95619 227 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 UQCRHP07919 91 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 ZNF75DP51815 510 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 TTF1Q15361 905 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 DUOX1Q9NRD9 1551 aa8.37□□□□□ -1.07
CTNNA1-244ENST00000627109 ZAP70P43403 619 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 HLFQ16534 295 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ANO6Q4KMQ2 910 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ADALQ6DHV7 355 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 BRAPQ7Z569 592 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 DZIP3Q86Y13 1208 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ELOA2Q8IYF1 753 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ZNF396Q96N95 335 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 USP28Q96RU2 1077 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 PDCL3Q9H2J4 239 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 TTC12Q9H892 705 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 MYH6P13533 1939 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 STK36Q9NRP7 1315 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 MYH2Q9UKX2 1941 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 IFIT5Q13325 482 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 TTC39AQ5SRH9 613 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 TTLL5Q6EMB2 1281 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ZSCAN25Q6NSZ9 544 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 SGMS1Q86VZ5 419 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 MROH5Q6ZUA9 1318 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 PLSCR1O15162 318 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 PDE8AO60658 829 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 PDE8BO95263 885 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 DHX40Q8IX18 779 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 LINC00301Q8NCQ3 95 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
CTNNA1-244ENST00000627109 ITGA6P23229 1130 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 ZRSR1Q15695 479 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 ATP2B3Q16720 1220 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 NCOA7Q8NI08 942 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 GREM2Q9H772 168 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 LY75O60449 1722 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 SH2B2O14492 632 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 GPAA1O43292 621 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 RCAN1P53805 252 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 C17orf53Q8N3J3 647 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 FAM89AQ96GI7 184 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 CAMKK2Q96RR4 588 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 TAF1LQ8IZX4 1826 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 EIF5P55010 431 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 NTRK3Q16288 839 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 LUZP1Q86V48 1076 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 PNPLA7Q6ZV29 1317 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 NHSQ6T4R5 1651 aa8.35□□□□□ -1.07
CTNNA1-244ENST00000627109 GOLGA6L6A8MZA4 724 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 SOCS7O14512 581 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 GUCY1B3Q02153 619 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 STX1AQ16623 288 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms