RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 LIN7AO14910 233 aaPredicted RBP5.87□□□□□ -1.47
CHD2-204ENST00000625463 TTI1O43156 1089 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 TROVE2P10155 538 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD2-204ENST00000625463 PIK3CAP42336 1068 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 PLA2G4AP47712 749 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CCT8P50990 548 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 TUBA1BP68363 451 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CUL3Q13618 768 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CUL4BQ13620 913 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 KCTD2Q14681 263 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 INAQ16352 499 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 DDB1Q16531 1140 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 ZSCAN23Q3MJ62 389 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD2-204ENST00000625463 BOLA3Q53S33 107 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 SPDYCQ5MJ68 293 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 C6orf132Q5T0Z8 1188 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 MTHFD1LQ6UB35 978 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 TMCO3Q6UWJ1 677 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 TUBA1AQ71U36 451 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 DAAM2Q86T65 1068 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 MAGEC3Q8TD91 643 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 SPIRE2Q8WWL2 714 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CTNNBL1Q8WYA6 563 aaPredicted RBP5.87□□□□□ -1.47
CHD2-204ENST00000625463 CUL5Q93034 780 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 SLC35B4Q969S0 331 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 RNPC3Q96LT9 517 aaKnown RBP5.87□□□□□ -1.47
CHD2-204ENST00000625463 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 PHOX2BQ99453 314 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CORO1BQ9BR76 489 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 REPIN1Q9BWE0 567 aaKnown RBP5.87□□□□□ -1.47
CHD2-204ENST00000625463 UBXN6Q9BZV1 441 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 MUC3BQ9H195 1237 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 SYNCQ9H7C4 482 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 MRS2Q9HD23 443 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 DDX25Q9UHL0 483 aaKnown RBP5.87□□□□□ -1.47
CHD2-204ENST00000625463 MKL2Q9ULH7 1088 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD2-204ENST00000625463 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 COG6Q9Y2V7 657 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 CECR2Q9BXF3 1484 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 ERICH3Q5RHP9 1530 aa5.87□□□□□ -1.47
CHD2-204ENST00000625463 BAZ1AQ9NRL2 1556 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 NLRP1Q9C000 1473 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 CNTLNQ9NXG0 1405 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 YEATS2Q9ULM3 1422 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 MAP3K5Q99683 1374 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 ELP1O95163 1332 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 ERICH2A1L162 156 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 PLEKHG3A1L390 1219 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 TARSL2A2RTX5 802 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 TMEM221A6NGB7 291 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 SPDYE3A6NKU9 549 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 FGFR1OPO95684 399 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 PNMA6AP0CW24 399 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 HSPA1AP0DMV8 641 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 HSPA1BP0DMV9 641 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 H2AFXP16104 143 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 DDIT3P35638 169 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 TCF7P36402 384 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 LMAN1P49257 510 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 PAPOLAP51003 745 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 MAP7Q14244 749 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 SUZ12Q15022 739 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 CCDC158Q5M9N0 1113 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 RPAP2Q8IXW5 612 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 SLC7A5P1Q8MH63 180 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 ACMSDQ8TDX5 336 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 PPP2R3CQ969Q6 453 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 ZDHHC16Q969W1 377 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 EPSTI1Q96J88 318 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 RPS6KC1Q96S38 1066 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 GORASP1Q9BQQ3 440 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 TANGO6Q9C0B7 1094 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 ALDH8A1Q9H2A2 487 aaPredicted RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 TNMDQ9H2S6 317 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 MRPL46Q9H2W6 279 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 QTRT2Q9H974 415 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 ATP6V0A4Q9HBG4 840 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 PDRG1Q9NUG6 133 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 TFIP11Q9UBB9 837 aaKnown RBP5.86□□□□□ -1.47
CHD2-204ENST00000625463 RCAN3Q9UKA8 241 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 LHX6Q9UPM6 363 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 LZTS1Q9Y250 596 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 PRELID1Q9Y255 219 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
CHD2-204ENST00000625463 NCOA2Q15596 1464 aa5.85□□□□□ -1.47
CHD2-204ENST00000625463 CCDC171Q6TFL3 1326 aa5.85□□□□□ -1.47
CHD2-204ENST00000625463 ATXN2Q99700 1313 aaKnown RBP5.85□□□□□ -1.47
CHD2-204ENST00000625463 POLR3GO15318 223 aaPredicted RBP5.85□□□□□ -1.47
CHD2-204ENST00000625463 P4HA2O15460 535 aa5.85□□□□□ -1.47
CHD2-204ENST00000625463 SART1O43290 800 aaKnown RBP5.85□□□□□ -1.47
CHD2-204ENST00000625463 SGTAO43765 313 aa5.85□□□□□ -1.47
CHD2-204ENST00000625463 SLU7O95391 586 aaKnown RBP5.85□□□□□ -1.47
CHD2-204ENST00000625463 LDHCP07864 332 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms