RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
SNX1-214ENST00000625244 INPP5BP32019 993 aa17.82■□□□□ 0.44
SNX1-214ENST00000625244 CASP7P55210 303 aa17.82■□□□□ 0.44
SNX1-214ENST00000625244 GRIK5Q16478 980 aa17.82■□□□□ 0.44
SNX1-214ENST00000625244 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
SNX1-214ENST00000625244 KCNH4Q9UQ05 1017 aa17.82■□□□□ 0.44
SNX1-214ENST00000625244 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 POTEB2H3BUK9 544 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 GPAT2Q6NUI2 795 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 MIGA2Q7L4E1 593 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
SNX1-214ENST00000625244 IRF5Q13568 498 aa17.8■□□□□ 0.44
SNX1-214ENST00000625244 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
SNX1-214ENST00000625244 FAM161BQ96MY7 647 aa17.8■□□□□ 0.44
SNX1-214ENST00000625244 GCKRQ14397 625 aa17.79■□□□□ 0.44
SNX1-214ENST00000625244 ZNF341Q9BYN7 854 aa17.79■□□□□ 0.44
SNX1-214ENST00000625244 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX1-214ENST00000625244 MGAMO43451 1857 aa17.79■□□□□ 0.44
SNX1-214ENST00000625244 PLIN1O60240 522 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 COL9A1P20849 921 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 FAM109BQ6ICB4 259 aaPredicted RBP17.78■□□□□ 0.44
SNX1-214ENST00000625244 ANKLE1Q8NAG6 615 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 TAOK2Q9UL54 1235 aa17.78■□□□□ 0.44
SNX1-214ENST00000625244 A0A1B0GUL6 1792 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 TNPO2O14787 897 aaKnown RBP17.77■□□□□ 0.44
SNX1-214ENST00000625244 GYG1P46976 350 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 FAM83AQ86UY5 434 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 HOOK2Q96ED9 719 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 NBPF3Q9H094 633 aa17.77■□□□□ 0.44
SNX1-214ENST00000625244 C11orf49Q9H6J7 331 aa17.76■□□□□ 0.43
SNX1-214ENST00000625244 HIBADHP31937 336 aaKnown RBP17.75■□□□□ 0.43
SNX1-214ENST00000625244 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
SNX1-214ENST00000625244 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
SNX1-214ENST00000625244 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNX1-214ENST00000625244 ZNF112Q9UJU3 913 aa17.75■□□□□ 0.43
SNX1-214ENST00000625244 HDLBPQ00341 1268 aaKnown RBP17.74■□□□□ 0.43
SNX1-214ENST00000625244 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
SNX1-214ENST00000625244 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
SNX1-214ENST00000625244 G2E3Q7L622 706 aa17.74■□□□□ 0.43
SNX1-214ENST00000625244 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
SNX1-214ENST00000625244 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
SNX1-214ENST00000625244 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
SNX1-214ENST00000625244 RAPGEFL1Q9UHV5 662 aa17.74■□□□□ 0.43
SNX1-214ENST00000625244 FOXO4P98177 505 aa17.73■□□□□ 0.43
SNX1-214ENST00000625244 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
SNX1-214ENST00000625244 TEKT1Q969V4 418 aa17.73■□□□□ 0.43
SNX1-214ENST00000625244 ZDHHC15Q96MV8 337 aa17.73■□□□□ 0.43
SNX1-214ENST00000625244 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
SNX1-214ENST00000625244 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
SNX1-214ENST00000625244 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
SNX1-214ENST00000625244 CXCL11O14625 94 aa17.72■□□□□ 0.43
SNX1-214ENST00000625244 TRIM32Q13049 653 aa17.72■□□□□ 0.43
SNX1-214ENST00000625244 NOL9Q5SY16 702 aaKnown RBP17.72■□□□□ 0.43
SNX1-214ENST00000625244 IQSEC3Q9UPP2 1182 aaPredicted RBP17.72■□□□□ 0.43
SNX1-214ENST00000625244 DOCK3Q8IZD9 2030 aa17.72■□□□□ 0.43
SNX1-214ENST00000625244 PFASO15067 1338 aa17.72■□□□□ 0.43
SNX1-214ENST00000625244 GNAI1P63096 354 aa17.71■□□□□ 0.43
SNX1-214ENST00000625244 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
SNX1-214ENST00000625244 LDHAL6AQ6ZMR3 332 aa17.71■□□□□ 0.43
SNX1-214ENST00000625244 MAFAQ8NHW3 353 aaPredicted RBP17.71■□□□□ 0.43
SNX1-214ENST00000625244 CDX2Q99626 313 aaPredicted RBP17.71■□□□□ 0.43
SNX1-214ENST00000625244 CNNM1Q9NRU3 951 aa17.71■□□□□ 0.43
SNX1-214ENST00000625244 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
SNX1-214ENST00000625244 A0A0G2JLL6 359 aaPredicted RBP17.7■□□□□ 0.42
SNX1-214ENST00000625244 UBE4AQ14139 1066 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 PRRT2Q7Z6L0 340 aaPredicted RBP17.7■□□□□ 0.42
SNX1-214ENST00000625244 COA7Q96BR5 231 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 OGDHLQ9ULD0 1010 aa17.7■□□□□ 0.42
SNX1-214ENST00000625244 HMGCRP04035 888 aa17.69■□□□□ 0.42
SNX1-214ENST00000625244 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
SNX1-214ENST00000625244 FASTKD5Q7L8L6 764 aaKnown RBP17.69■□□□□ 0.42
SNX1-214ENST00000625244 ANKRD13CQ8N6S4 541 aa17.69■□□□□ 0.42
SNX1-214ENST00000625244 FAM151AQ8WW52 585 aa17.69■□□□□ 0.42
SNX1-214ENST00000625244 MRIQ9BWK5 157 aa17.69■□□□□ 0.42
SNX1-214ENST00000625244 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
SNX1-214ENST00000625244 TCP10Q12799 353 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
SNX1-214ENST00000625244 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 ZHX2Q9Y6X8 837 aa17.68■□□□□ 0.42
SNX1-214ENST00000625244 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
SNX1-214ENST00000625244 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
SNX1-214ENST00000625244 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
SNX1-214ENST00000625244 LINS1Q8NG48 757 aa17.67■□□□□ 0.42
SNX1-214ENST00000625244 TBC1D22AQ8WUA7 517 aa17.67■□□□□ 0.42
SNX1-214ENST00000625244 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
SNX1-214ENST00000625244 COL6A1P12109 1028 aa17.66■□□□□ 0.42
SNX1-214ENST00000625244 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
SNX1-214ENST00000625244 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
SNX1-214ENST00000625244 GJD2Q9UKL4 321 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms