RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 SNCAIPQ9Y6H5 919 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 GNAI3P08754 354 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 GTF2A2P52657 109 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 NFIAQ12857 509 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 CCDC102BQ68D86 513 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 OTOP1Q7RTM1 612 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 DENND2AQ9ULE3 1009 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 DOCK2Q92608 1830 aa17.04■□□□□ 0.32
USH1C-211ENST00000624811 ZSWIM8A7E2V4 1837 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 SPDYE5A6NIY4 337 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 TRIM27P14373 513 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 TFCP2Q12800 502 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
USH1C-211ENST00000624811 FKBP1CQ5VVH2 108 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
USH1C-211ENST00000624811 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.32
USH1C-211ENST00000624811 A0A1B0GUL7 405 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
USH1C-211ENST00000624811 INPP5BP32019 993 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 CAP1Q01518 475 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
USH1C-211ENST00000624811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
USH1C-211ENST00000624811 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 SEMA3EO15041 775 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 SP3Q02447 781 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 ERO1BQ86YB8 467 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 ZFPM1Q8IX07 1006 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 NEUROD6Q96NK8 337 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
USH1C-211ENST00000624811 IRF6O14896 467 aa17■□□□□ 0.31
USH1C-211ENST00000624811 DZIP1Q86YF9 867 aaKnown RBP17■□□□□ 0.31
USH1C-211ENST00000624811 EFCC1Q9HA90 598 aa17■□□□□ 0.31
USH1C-211ENST00000624811 ZFYVE28Q9HCC9 887 aa17■□□□□ 0.31
USH1C-211ENST00000624811 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
USH1C-211ENST00000624811 GNAI2P04899 355 aa16.99■□□□□ 0.31
USH1C-211ENST00000624811 CETPP11597 493 aa16.99■□□□□ 0.31
USH1C-211ENST00000624811 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
USH1C-211ENST00000624811 MTX1Q13505 466 aa16.99■□□□□ 0.31
USH1C-211ENST00000624811 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
USH1C-211ENST00000624811 PTPN22Q9Y2R2 807 aa16.99■□□□□ 0.31
USH1C-211ENST00000624811 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 BTBD19C9JJ37 291 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 RGS3P49796 1198 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 PPIL2Q13356 520 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 SNAPC2Q13487 334 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 MIER1Q8N108 512 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
USH1C-211ENST00000624811 TMEM57Q8N5G2 664 aa16.98■□□□□ 0.31
USH1C-211ENST00000624811 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
USH1C-211ENST00000624811 PICALMQ13492 652 aa16.97■□□□□ 0.31
USH1C-211ENST00000624811 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
USH1C-211ENST00000624811 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
USH1C-211ENST00000624811 PI16Q6UXB8 463 aa16.97■□□□□ 0.31
USH1C-211ENST00000624811 GAKO14976 1311 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 BTDP43251 543 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 PPATQ06203 517 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
USH1C-211ENST00000624811 ZKSCAN2Q63HK3 967 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
USH1C-211ENST00000624811 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 C1orf115Q9H7X2 142 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
USH1C-211ENST00000624811 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
USH1C-211ENST00000624811 MECOMQ03112 1051 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
USH1C-211ENST00000624811 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 SH3BP5LQ7L8J4 393 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
USH1C-211ENST00000624811 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
USH1C-211ENST00000624811 RBBP6Q7Z6E9 1792 aaKnown RBP16.94■□□□□ 0.3
USH1C-211ENST00000624811 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
USH1C-211ENST00000624811 PTCH2Q9Y6C5 1203 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 MYO5AQ9Y4I1 1855 aaKnown RBP16.94■□□□□ 0.3
USH1C-211ENST00000624811 HTTP42858 3142 aa16.94■□□□□ 0.3
USH1C-211ENST00000624811 KIAA0100Q14667 2235 aaKnown RBP16.93■□□□□ 0.3
USH1C-211ENST00000624811 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
USH1C-211ENST00000624811 PDHXO00330 501 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms