RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SERPINC1P01008 464 aa10.02□□□□□ -0.81
VCL-207ENST00000624354 ETF1P62495 437 aaKnown RBP10.02□□□□□ -0.81
VCL-207ENST00000624354 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
VCL-207ENST00000624354 NEK11Q8NG66 645 aa10.02□□□□□ -0.81
VCL-207ENST00000624354 SYTL4Q96C24 671 aaPredicted RBP10.02□□□□□ -0.81
VCL-207ENST00000624354 PRDM11Q9NQV5 511 aa10.02□□□□□ -0.81
VCL-207ENST00000624354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.811e-7■□□□□ 11.2
VCL-207ENST00000624354 UBASH3AP57075 661 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 MYL5Q02045 173 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 MYH15Q9Y2K3 1946 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 AFDNP55196 1824 aaKnown RBP10.01□□□□□ -0.81
VCL-207ENST00000624354 LAMA4Q16363 1823 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 FOXP2O15409 715 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 WDHD1O75717 1129 aaPredicted RBP10.01□□□□□ -0.81
VCL-207ENST00000624354 ANTXR2P58335 489 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 CPLX2Q6PUV4 134 aaKnown RBP10.01□□□□□ -0.81
VCL-207ENST00000624354 XAGE2Q96GT9 111 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 GEMIN8Q9NWZ8 242 aaKnown RBP10.01□□□□□ -0.81
VCL-207ENST00000624354 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 WDR19Q8NEZ3 1342 aa10.01□□□□□ -0.81
VCL-207ENST00000624354 POLR3GO15318 223 aaPredicted RBP10□□□□□ -0.81
VCL-207ENST00000624354 CDKL5O76039 1030 aa10□□□□□ -0.81
VCL-207ENST00000624354 ATP1A3P13637 1013 aa10□□□□□ -0.81
VCL-207ENST00000624354 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
VCL-207ENST00000624354 GTF2A1P52655 376 aaPredicted RBP10□□□□□ -0.81
VCL-207ENST00000624354 CTR9Q6PD62 1173 aa10□□□□□ -0.81
VCL-207ENST00000624354 KRBA2Q6ZNG9 492 aa10□□□□□ -0.81
VCL-207ENST00000624354 PUS7LQ9H0K6 701 aaKnown RBP10□□□□□ -0.81
VCL-207ENST00000624354 DNAI1Q9UI46 699 aa10□□□□□ -0.81
VCL-207ENST00000624354 FHOD1Q9Y613 1164 aa10□□□□□ -0.81
VCL-207ENST00000624354 PLEKHG2Q9H7P9 1386 aa10□□□□□ -0.81
VCL-207ENST00000624354 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
VCL-207ENST00000624354 GPAA1O43292 621 aa10□□□□□ -0.81
VCL-207ENST00000624354 PPP6R2O75170 966 aa10□□□□□ -0.81
VCL-207ENST00000624354 ADORA1P30542 326 aa10□□□□□ -0.81
VCL-207ENST00000624354 GPS2Q13227 327 aa10□□□□□ -0.81
VCL-207ENST00000624354 OLFM4Q6UX06 510 aa10□□□□□ -0.81
VCL-207ENST00000624354 VPS37DQ86XT2 251 aa10□□□□□ -0.81
VCL-207ENST00000624354 C10orf67Q8IYJ2 551 aa10□□□□□ -0.81
VCL-207ENST00000624354 FBXO3Q9UK99 471 aa10□□□□□ -0.81
VCL-207ENST00000624354 MROH7-TTC4A0A0A0MT08 1334 aa10□□□□□ -0.81
VCL-207ENST00000624354 PHLPP2Q6ZVD8 1323 aa10□□□□□ -0.81
VCL-207ENST00000624354 A1BGP04217 495 aa10□□□□□ -0.81
VCL-207ENST00000624354 PNMA6AP0CW24 399 aaPredicted RBP10□□□□□ -0.81
VCL-207ENST00000624354 ZAP70P43403 619 aa10□□□□□ -0.81
VCL-207ENST00000624354 METAP2P50579 478 aaKnown RBP eCLIP10□□□□□ -0.813e-6■■□□□ 14.5
VCL-207ENST00000624354 ARHGAP29Q52LW3 1261 aa10□□□□□ -0.81
VCL-207ENST00000624354 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
VCL-207ENST00000624354 UBXN4Q92575 508 aa10□□□□□ -0.81
VCL-207ENST00000624354 ARGLU1Q9NWB6 273 aaPredicted RBP10□□□□□ -0.81
VCL-207ENST00000624354 ANGEL1Q9UNK9 670 aaKnown RBP10□□□□□ -0.81
VCL-207ENST00000624354 TOP1P11387 765 aaKnown RBP9.99□□□□□ -0.81
VCL-207ENST00000624354 NOP2P46087 812 aaKnown RBP9.99□□□□□ -0.81
VCL-207ENST00000624354 PLA2G4AP47712 749 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 EVA1CP58658 441 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 FAM182BQ5T319 152 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 MNS1Q8NEH6 495 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 SRRTQ9BXP5 876 aaKnown RBP9.99□□□□□ -0.81
VCL-207ENST00000624354 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.99□□□□□ -0.814e-7■■□□□ 14.3
VCL-207ENST00000624354 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
VCL-207ENST00000624354 HPSEQ9Y251 543 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 ZMYM6O95789 1325 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 CLCN6P51797 869 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 KRT40Q6A162 431 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 TMX1Q9H3N1 280 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 C1orf167Q5SNV9 1468 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 ZSCAN12O43309 604 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 MYO1BO43795 1136 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 CASQ1P31415 396 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 TRIM29Q14134 588 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 SCARF1Q14162 830 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 SHC4Q6S5L8 630 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 AIFM3Q96NN9 605 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 UTP14AQ9BVJ6 771 aaKnown RBP9.99□□□□□ -0.81
VCL-207ENST00000624354 HSD3B7Q9H2F3 369 aa9.99□□□□□ -0.81
VCL-207ENST00000624354 SPEF2Q9C093 1822 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 CPDO75976 1380 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 MST1RQ04912 1400 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 MYO1CO00159 1063 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 PNOCQ13519 176 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 CCDC102BQ68D86 513 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 TMCO3Q6UWJ1 677 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 LRRN4CLQ8ND94 238 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 DPF2Q92785 391 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 URI1O94763 535 aaPredicted RBP9.98□□□□□ -0.81
VCL-207ENST00000624354 TOM1L2Q6ZVM7 507 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 VSTM4Q8IW00 320 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 TRPM3Q9HCF6 1732 aaPredicted RBP9.98□□□□□ -0.81
VCL-207ENST00000624354 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
VCL-207ENST00000624354 APPP05067 770 aa9.97□□□□□ -0.81
VCL-207ENST00000624354 PTPAQ15257 358 aa9.97□□□□□ -0.81
VCL-207ENST00000624354 ZSCAN26Q16670 478 aa9.97□□□□□ -0.81
VCL-207ENST00000624354 RESP18Q5W5W9 173 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms