RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 PARP10Q53GL7 1025 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 STK11IPQ8N1F8 1099 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 PLCH1Q4KWH8 1693 aa13.94□□□□□ -0.18
TP53-227ENST00000622645 WTIPA6NIX2 430 aaPredicted RBP13.93□□□□□ -0.18
TP53-227ENST00000622645 GSG1L2A8MUP6 293 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 SPTLC2O15270 562 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 CHRNDQ07001 517 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 ALX1Q15699 326 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 STX1AQ16623 288 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 TMEM67Q5HYA8 995 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 BRAPQ7Z569 592 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 MIGA1Q8NAN2 632 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 LRP5O75197 1615 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 ZBTB43O43298 467 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 CAVIN2O95810 425 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 TPM3P06753 285 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 KCNG4Q8TDN1 519 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
TP53-227ENST00000622645 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 YEATS4O95619 227 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 KCNQ4P56696 695 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 LRMPQ12912 555 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 FAM217BQ9NTX9 383 aaPredicted RBP13.92□□□□□ -0.18
TP53-227ENST00000622645 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
TP53-227ENST00000622645 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
TP53-227ENST00000622645 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
TP53-227ENST00000622645 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
TP53-227ENST00000622645 KRT40Q6A162 431 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 ZKSCAN3Q9BRR0 538 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
TP53-227ENST00000622645 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
TP53-227ENST00000622645 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
TP53-227ENST00000622645 NTRK3Q16288 839 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 DDX60Q8IY21 1712 aaKnown RBP13.91□□□□□ -0.18
TP53-227ENST00000622645 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 BECN2A8MW95 431 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 CDKL5O76039 1030 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 TDO2P48775 406 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
TP53-227ENST00000622645 MYH14Q7Z406 1995 aaKnown RBP13.91□□□□□ -0.18
TP53-227ENST00000622645 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 CPLX2Q6PUV4 134 aaKnown RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 DHX40Q8IX18 779 aaKnown RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 ANO10Q9NW15 660 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 CLIP2Q9UDT6 1046 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 SPATA31A5Q5VU36 1347 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 SPATA31A7Q8IWB4 1347 aa13.9□□□□□ -0.18
TP53-227ENST00000622645 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.18
TP53-227ENST00000622645 LIFRP42702 1097 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 GYG1P46976 350 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 COL4A1P02462 1669 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 ZNF202O95125 648 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
TP53-227ENST00000622645 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.89□□□□□ -0.19
TP53-227ENST00000622645 SLC26A6Q9BXS9 759 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 NACAP1Q9BZK3 213 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 WNK3Q9BYP7 1800 aa13.89□□□□□ -0.19
TP53-227ENST00000622645 SMIM22K7EJ46 135 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 AOPEPQ8N6M6 819 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 KIAA1468Q9P260 1216 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 PFKFB1P16118 471 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 CYP7A1P22680 504 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms