RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RESP18Q5W5W9 173 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 APPBP2Q92624 585 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 MAP3K14Q99558 947 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 ALG1Q9BT22 464 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 CARD6Q9BX69 1037 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 INTS13Q9NVM9 706 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 PODXL2Q9NZ53 605 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 CEP126Q9P2H0 1117 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 VWA3AA6NCI4 1184 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 EFCAB8A8MWE9 144 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 TOP1P11387 765 aaKnown RBP22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 SCARF1Q14162 830 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 PTPN21Q16825 1174 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 METTL16Q86W50 562 aaKnown RBP22.56■■□□□ 1.2
PDLIM3-212ENST00000620787 MYO1BO43795 1136 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 JMYQ8N9B5 988 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 XAGE2Q96GT9 111 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 FANCLQ9NW38 375 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 ZNF213O14771 459 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 ZSCAN12O43309 604 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 KRT40Q6A162 431 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 CCDC191Q8NCU4 936 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 PPP2R2CQ9Y2T4 447 aa22.55■■□□□ 1.2
PDLIM3-212ENST00000620787 ADAMTSL3P82987 1691 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 CLIC6Q96NY7 704 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 ARHGAP6O43182 974 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 GPAA1O43292 621 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 OLFM4Q6UX06 510 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 NKX2-3Q8TAU0 364 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 DENND2AQ9ULE3 1009 aa22.54■■□□□ 1.2
PDLIM3-212ENST00000620787 ZAP70P43403 619 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 TBX2Q13207 712 aaPredicted RBP22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 C19orf44Q9H6X5 657 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 PLEKHG2Q9H7P9 1386 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 AKAP11Q9UKA4 1901 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 PDE4BQ07343 736 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 LONRF3Q496Y0 759 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 CALCOCO1Q9P1Z2 691 aa22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 ANGEL1Q9UNK9 670 aaKnown RBP22.53■■□□□ 1.2
PDLIM3-212ENST00000620787 A0A0U1RQG5 324 aaPredicted RBP22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 SEC31AO94979 1220 aaKnown RBP22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 TPM1P09493 284 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 BMP6P22004 513 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 CDC27P30260 824 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 METAP2P50579 478 aaKnown RBP eCLIP22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 KRBA2Q6ZNG9 492 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 MPHOSPH8Q99549 860 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.52■■□□□ 1.2
PDLIM3-212ENST00000620787 CYB5R4Q7L1T6 521 aa22.52■■□□□ 1.19
PDLIM3-212ENST00000620787 UBXN6Q9BZV1 441 aa22.52■■□□□ 1.19
PDLIM3-212ENST00000620787 PCDHA5Q9Y5H7 936 aa22.52■■□□□ 1.19
PDLIM3-212ENST00000620787 ABCC12Q96J65 1359 aa22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 CUTAO60888 179 aa22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 PI16Q6UXB8 463 aa22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 AKAP2Q9Y2D5 859 aa22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 MYO5AQ9Y4I1 1855 aaKnown RBP22.51■■□□□ 1.19
PDLIM3-212ENST00000620787 SH2B2O14492 632 aaPredicted RBP22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 ATP8B1O43520 1251 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 CDKL5O76039 1030 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 CSB-PGBD3P0DP91 1061 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 RXRAP19793 462 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 CCDC102BQ68D86 513 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 PHKBQ93100 1093 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 WDR24Q96S15 920 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 FAM177A1Q8N128 213 aaPredicted RBP22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 KCNH3Q9ULD8 1083 aa22.5■■□□□ 1.19
PDLIM3-212ENST00000620787 A1BGP04217 495 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 MAP3K9P80192 1104 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 GNL2Q13823 731 aaKnown RBP22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 APOA5Q6Q788 366 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 CNNM3Q8NE01 707 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 BAG1Q99933 345 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 EPC1Q9H2F5 836 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 C1orf167Q5SNV9 1468 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 FOXN1O15353 648 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 TBC1D8O95759 1140 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 TRHP20396 242 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 MDM2Q00987 491 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 SENP2Q9HC62 589 aa22.49■■□□□ 1.19
PDLIM3-212ENST00000620787 SASH3O75995 380 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 CASQ1P31415 396 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 TRDNQ13061 729 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 CCDC57Q2TAC2 916 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 TC2NQ8N9U0 490 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 MRFAP1Q9Y605 127 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 GOLGA6L9A6NEM1 432 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 NTRK3Q16288 839 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 CC2D1AQ6P1N0 951 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 TOGARAM2Q6ZUX3 1019 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 FBXO3Q9UK99 471 aa22.48■■□□□ 1.19
PDLIM3-212ENST00000620787 TAOK2Q9UL54 1235 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms