RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 OTUD7BQ6GQQ9 843 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 HHIPL2Q6UWX4 724 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 MRIQ9BWK5 157 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 PRDX5P30044 214 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 TIMM10P62072 90 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 VGLL4Q14135 290 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.86■□□□□ 0.77
CD40-207ENST00000620709 DENND2AQ9ULE3 1009 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 HPS5Q9UPZ3 1129 aa19.86■□□□□ 0.77
CD40-207ENST00000620709 RGS19P49795 217 aa19.85■□□□□ 0.77
CD40-207ENST00000620709 TCP10Q12799 353 aa19.85■□□□□ 0.77
CD40-207ENST00000620709 PKN2Q16513 984 aaKnown RBP19.85■□□□□ 0.77
CD40-207ENST00000620709 OTUD5Q96G74 571 aa19.85■□□□□ 0.77
CD40-207ENST00000620709 TFCP2Q12800 502 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 CCDC102BQ68D86 513 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 FAM83AQ86UY5 434 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.84■□□□□ 0.77
CD40-207ENST00000620709 WRNIP1Q96S55 665 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 CFHR5Q9BXR6 569 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
CD40-207ENST00000620709 DAGLAQ9Y4D2 1042 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 AK9Q5TCS8 1911 aa19.84■□□□□ 0.77
CD40-207ENST00000620709 GNAI2P04899 355 aa19.83■□□□□ 0.77
CD40-207ENST00000620709 NOM1Q5C9Z4 860 aaKnown RBP19.83■□□□□ 0.77
CD40-207ENST00000620709 MIGA2Q7L4E1 593 aa19.83■□□□□ 0.77
CD40-207ENST00000620709 HOOK2Q96ED9 719 aa19.83■□□□□ 0.77
CD40-207ENST00000620709 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.77
CD40-207ENST00000620709 SEMA3EO15041 775 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 CRHR2Q13324 411 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 FKBP1CQ5VVH2 108 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 CDC42EP5Q6NZY7 148 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 ZKSCAN4Q969J2 545 aaPredicted RBP19.82■□□□□ 0.76
CD40-207ENST00000620709 PTPN18Q99952 460 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 ABCF2Q9UG63 623 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 AKAP2Q9Y2D5 859 aa19.82■□□□□ 0.76
CD40-207ENST00000620709 CCL15-CCL14A0A0B4J2E2 113 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 A0A1B0GUL7 405 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 CCL15Q16663 113 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 DCAF15Q66K64 600 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 TRIM17Q9Y577 477 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 GTF2A2P52657 109 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 GORABQ5T7V8 394 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 DZIP1Q86YF9 867 aaKnown RBP19.81■□□□□ 0.76
CD40-207ENST00000620709 XAGE2Q96GT9 111 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 ZNF341Q9BYN7 854 aa19.81■□□□□ 0.76
CD40-207ENST00000620709 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
CD40-207ENST00000620709 FBXO46Q6PJ61 603 aaPredicted RBP19.8■□□□□ 0.76
CD40-207ENST00000620709 ZGPATQ8N5A5 531 aaKnown RBP19.8■□□□□ 0.76
CD40-207ENST00000620709 FAM151AQ8WW52 585 aa19.8■□□□□ 0.76
CD40-207ENST00000620709 BRI3BPQ8WY22 251 aa19.8■□□□□ 0.76
CD40-207ENST00000620709 MS4A4AQ96JQ5 239 aa19.8■□□□□ 0.76
CD40-207ENST00000620709 SALL1Q9NSC2 1324 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 TESPA1A2RU30 521 aaPredicted RBP19.79■□□□□ 0.76
CD40-207ENST00000620709 NFIAQ12857 509 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 G3BP1Q13283 466 aaKnown RBP eCLIP19.79■□□□□ 0.76
CD40-207ENST00000620709 MTX1Q13505 466 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 CD99L2Q8TCZ2 262 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 SNCAIPQ9Y6H5 919 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 LAMB1P07942 1786 aa19.79■□□□□ 0.76
CD40-207ENST00000620709 PNMA6EA0A0J9YXQ4 647 aa19.78■□□□□ 0.76
CD40-207ENST00000620709 TAF1CQ15572 869 aaPredicted RBP19.78■□□□□ 0.76
CD40-207ENST00000620709 ERO1AQ96HE7 468 aa19.78■□□□□ 0.76
CD40-207ENST00000620709 MYH2Q9UKX2 1941 aa19.77■□□□□ 0.76
CD40-207ENST00000620709 SPDYE5A6NIY4 337 aa19.77■□□□□ 0.76
CD40-207ENST00000620709 ERO1BQ86YB8 467 aa19.77■□□□□ 0.76
CD40-207ENST00000620709 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
CD40-207ENST00000620709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.77■□□□□ 0.76
CD40-207ENST00000620709 INPP5BP32019 993 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 OS9Q13438 667 aaPredicted RBP19.76■□□□□ 0.75
CD40-207ENST00000620709 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
CD40-207ENST00000620709 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
CD40-207ENST00000620709 ZSCAN29Q8IWY8 852 aaPredicted RBP19.76■□□□□ 0.75
CD40-207ENST00000620709 ZFYVE28Q9HCC9 887 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 FAM198AQ9UFP1 575 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 RPAP1Q9BWH6 1393 aaPredicted RBP19.76■□□□□ 0.75
CD40-207ENST00000620709 CETPP11597 493 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 SP3Q02447 781 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 ERICH6Q7L0X2 663 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 ZFPM1Q8IX07 1006 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 SLF2Q8IX21 1173 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 FAM43AQ8N2R8 423 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 C1orf115Q9H7X2 142 aa19.76■□□□□ 0.75
CD40-207ENST00000620709 TNRC18O15417 2968 aaPredicted RBP19.75■□□□□ 0.75
CD40-207ENST00000620709 IRF6O14896 467 aa19.75■□□□□ 0.75
CD40-207ENST00000620709 ZBTB7BO15156 539 aaPredicted RBP19.75■□□□□ 0.75
CD40-207ENST00000620709 WDHD1O75717 1129 aaPredicted RBP19.75■□□□□ 0.75
CD40-207ENST00000620709 RGS3P49796 1198 aa19.75■□□□□ 0.75
CD40-207ENST00000620709 SNAPC2Q13487 334 aa19.75■□□□□ 0.75
CD40-207ENST00000620709 PPIL2Q13356 520 aa19.74■□□□□ 0.75
CD40-207ENST00000620709 PICALMQ13492 652 aa19.74■□□□□ 0.75
CD40-207ENST00000620709 EFCC1Q9HA90 598 aa19.74■□□□□ 0.75
CD40-207ENST00000620709 BTDP43251 543 aa19.73■□□□□ 0.75
CD40-207ENST00000620709 PI16Q6UXB8 463 aa19.73■□□□□ 0.75
CD40-207ENST00000620709 TBC1D9Q6ZT07 1266 aa19.73■□□□□ 0.75
CD40-207ENST00000620709 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms